Difference between revisions of "RXN-10851"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP] == * smiles: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7785 RXN-7785] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7785 RXN-7785] ==
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* smiles:
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* direction:
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** CC1(N=C(N)C(=CN=1)COP(OP([O-])([O-])=O)([O-])=O)
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=AGQJQCFEPUVXNK-UHFFFAOYSA-K
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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* common name:
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** 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine
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* molecular weight:
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** 296.093   
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* Synonym(s):
 
* Synonym(s):
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** 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate
 
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** HMP-PP
 
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** 4-amino-5-hydroxymethyl-2-methylpyrimidine-PP
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[THI-P-SYN-RXN]]
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* With identifiers:
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* [[RXN-12610]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-7088]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7090]][c]
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* [[RXN-12611]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 oxygen[c] '''+''' 1 (2R,3S,4S)-leucodelphinidin[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 succinate[c] '''+''' 2 H2O[c] '''+''' 1 CO2[c] '''+''' 1 H+[c] '''+''' 1 delphinidin[c]
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* [[PYRIMSYN3-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_3330]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-5153]], anthocyanin biosynthesis (delphinidin 3-O-glucoside): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5153 PWY-5153]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 745-65-3
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* LIGAND-RXN:
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* CAS : 841-01-0
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** [http://www.genome.jp/dbget-bin/www_bget?R05037 R05037]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245586 25245586]
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{{#set: ec number=EC-1.14.11}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_3330}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57841 57841]
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{{#set: in pathway=PWY-5153}}
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* BIGG : 2mahmp
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{{#set: reconstruction category=orthology}}
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* LIGAND-CPD:
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{{#set: reconstruction source=orthology-esiliculosus}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04752 C04752]
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=CC1(N=C(N)C(=CN=1)COP(OP([O-])([O-])=O)([O-])=O)}}
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{{#set: inchi key=InChIKey=AGQJQCFEPUVXNK-UHFFFAOYSA-K}}
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{{#set: common name=4-amino-2-methyl-5-(diphosphomethyl)pyrimidine}}
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{{#set: molecular weight=296.093    }}
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{{#set: common name=2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate|HMP-PP|4-amino-5-hydroxymethyl-2-methylpyrimidine-PP}}
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{{#set: consumed by=THI-P-SYN-RXN|RXN-12610|RXN-12611}}
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{{#set: produced by=PYRIMSYN3-RXN}}
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Revision as of 16:38, 21 March 2018

Reaction RXN-7785

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5153, anthocyanin biosynthesis (delphinidin 3-O-glucoside): PWY-5153
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




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