Difference between revisions of "RXN-12669"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1825 CPD-1825] == * smiles: ** C1(OC(C(C(C1O)O)O)OP([O-])([O-])=O) * inchi key: ** InChIKey...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.18-RXN 3.4.11.18-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopep...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1825 CPD-1825] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.18-RXN 3.4.11.18-RXN] ==
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* smiles:
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* direction:
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** C1(OC(C(C(C1O)O)O)OP([O-])([O-])=O)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ILXHFXFPPZGENN-QMKXCQHVSA-L
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* common name:
 
* common name:
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** β-L-arabinose 1-phosphate
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** methionine_aminopeptidase
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* molecular weight:
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* ec number:
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** 228.095   
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** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
 
* Synonym(s):
 
* Synonym(s):
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** β-L-arabinose 1-P
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[UMPU]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[Protein-With-N-Terminal-Met]][c] '''=>''' 1 [[Peptides-holder]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 H2O[c] '''+''' 1 a peptide with an N-terminal L-methionine[c] '''=>''' 1 a peptide[c] '''+''' 1 L-methionine[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_3182]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_4247]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_5715]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244737 25244737]
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** [http://www.uniprot.org/uniprot/P38062 P38062]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P47418 P47418]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57521 57521]
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** [http://www.uniprot.org/uniprot/Q9PM25 Q9PM25]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P28617 P28617]
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** [http://www.genome.jp/dbget-bin/www_bget?C03906 C03906]
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** [http://www.uniprot.org/uniprot/P44421 P44421]
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* HMDB : HMDB12195
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** [http://www.uniprot.org/uniprot/Q9UYT4 Q9UYT4]
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{{#set: smiles=C1(OC(C(C(C1O)O)O)OP([O-])([O-])=O)}}
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** [http://www.uniprot.org/uniprot/P0AE18 P0AE18]
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{{#set: inchi key=InChIKey=ILXHFXFPPZGENN-QMKXCQHVSA-L}}
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** [http://www.uniprot.org/uniprot/P50579 P50579]
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{{#set: common name=β-L-arabinose 1-phosphate}}
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** [http://www.uniprot.org/uniprot/Q9JWK1 Q9JWK1]
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{{#set: molecular weight=228.095    }}
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** [http://www.uniprot.org/uniprot/Q58725 Q58725]
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{{#set: common name=β-L-arabinose 1-P}}
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** [http://www.uniprot.org/uniprot/P56218 P56218]
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{{#set: consumed by=UMPU}}
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** [http://www.uniprot.org/uniprot/P19994 P19994]
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** [http://www.uniprot.org/uniprot/P22624 P22624]
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** [http://www.uniprot.org/uniprot/P0A1X6 P0A1X6]
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** [http://www.uniprot.org/uniprot/P41392 P41392]
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** [http://www.uniprot.org/uniprot/Q59509 Q59509]
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** [http://www.uniprot.org/uniprot/Q01662 Q01662]
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** [http://www.uniprot.org/uniprot/P95963 P95963]
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** [http://www.uniprot.org/uniprot/P53579 P53579]
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** [http://www.uniprot.org/uniprot/P53581 P53581]
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** [http://www.uniprot.org/uniprot/P53580 P53580]
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** [http://www.uniprot.org/uniprot/Q9FV49 Q9FV49]
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** [http://www.uniprot.org/uniprot/Q9Z9J4 Q9Z9J4]
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** [http://www.uniprot.org/uniprot/Q9RKR2 Q9RKR2]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=methionine_aminopeptidase}}
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{{#set: ec number=EC-3.4.11.18}}
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{{#set: gene associated=Tiso_gene_3182|Tiso_gene_4247|Tiso_gene_5715}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:39, 21 March 2018

Reaction 3.4.11.18-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionine_aminopeptidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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