Difference between revisions of "PWY-2681"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] == * direction: ** LEFT-TO-RIGHT * common name: ** ribosomal_rna_small_subunit...")
 
(Created page with "Category:Gene == Gene Tiso_gene_17272 == * left end position: ** 2045 * transcription direction: ** POSITIVE * right end position: ** 2201 * centisome position: ** 53.6604...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] ==
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== Gene Tiso_gene_17272 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2045
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* common name:
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* transcription direction:
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** ribosomal_rna_small_subunit_methyltransferase_h
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.1.1.199 EC-2.1.1.199]
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** 2201
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* centisome position:
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** 53.660458   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[CDPKIN-RXN]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[16S-rRNA-cytidine1402]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[16S-rRNA-N4-methylcytidine1402]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytidine1402 in 16S rRNA[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 an N4-methylcytidine1402  in 16S rRNA[c]
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* [[DADPKIN-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[DCDPKIN-RXN]]
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* [[Tiso_gene_17723]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***AUTOMATED-NAME-MATCH
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* [[DGDPKIN-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** in-silico_annotation
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***AUTOMATED-NAME-MATCH
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***ec-number
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== Pathways ==
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* [[DTDPKIN-RXN]]
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== Reconstruction information  ==
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** in-silico_annotation
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* [[annotation]]:
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***ec-number
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** [[pathwaytools]]:
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* [[DUDPKIN-RXN]]
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*** [[experimental_annotation]]
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** in-silico_annotation
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*** [[in-silico_annotation]]
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***ec-number
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* [[GDPKIN-RXN]]
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** in-silico_annotation
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***ec-number
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* [[NUCLEOSIDE-DIP-KIN-RXN]]
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** in-silico_annotation
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***ec-number
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* [[RXN-14120]]
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** in-silico_annotation
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***ec-number
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* [[RXN-14228]]
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** in-silico_annotation
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***ec-number
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* [[UDPKIN-RXN]]
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** in-silico_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7176]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY-7205]]
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* [[PWY-7224]]
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* [[PWY-7197]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PPGPPMET-PWY]]
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* [[PWY-7226]]
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* [[PWY-7221]]
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* [[PWY-6545]]
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* [[PWY-7187]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=2045}}
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{{#set: common name=ribosomal_rna_small_subunit_methyltransferase_h}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.1.1.199}}
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{{#set: right end position=2201}}
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{{#set: gene associated=Tiso_gene_17723}}
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{{#set: centisome position=53.660458    }}
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{{#set: in pathway=}}
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{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:14, 10 January 2018

Gene Tiso_gene_17272

  • left end position:
    • 2045
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2201
  • centisome position:
    • 53.660458
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-2681&oldid=12073"