Difference between revisions of "SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_17232 == * left end position: ** 88 * transcription direction: ** POSITIVE * right end position: ** 1405 * centisome position: ** 2.2916667...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACSERLY-RXN ACSERLY-RXN] == * direction: ** REVERSIBLE * common name: ** cysteine_synthase ** cog00...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17232 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACSERLY-RXN ACSERLY-RXN] ==
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* left end position:
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* direction:
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** 88
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** REVERSIBLE
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* transcription direction:
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* common name:
−
** POSITIVE
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** cysteine_synthase
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* right end position:
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** cog0031:_cysteine_synthase
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** 1405
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** cysteine
−
* centisome position:
+
* ec number:
−
** 2.2916667   
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** [http://enzyme.expasy.org/EC/2.5.1.47 EC-2.5.1.47]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
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== Reaction Formula ==
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* [[GLYCPDIESTER-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ACETYLSERINE]][c] '''+''' 1 [[HS]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[ACET]][c]
−
***ec-number
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* With common name(s):
−
* [[RXN-14073]]
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** 1 O-acetyl-L-serine[c] '''+''' 1 hydrogen sulfide[c] '''<=>''' 1 H+[c] '''+''' 1 L-cysteine[c] '''+''' 1 acetate[c]
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** in-silico_annotation
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−
***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-14136]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_819]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-14160]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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** Source: [[annotation-experimental_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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== Pathways associated ==
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* Gene: [[Tiso_gene_7852]]
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* [[PWY-7409]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6952]]
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*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_17043]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6110]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_2283]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_12184]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[CYSTSYN-PWY]], L-cysteine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTSYN-PWY CYSTSYN-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=88}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14829 14829]
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{{#set: right end position=1405}}
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* LIGAND-RXN:
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{{#set: centisome position=2.2916667    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00897 R00897]
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{{#set: reaction associated=GLYCPDIESTER-RXN|RXN-14073|RXN-14136|RXN-14160}}
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* UNIPROT:
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{{#set: pathway associated=PWY-7409|PWY-6952}}
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** [http://www.uniprot.org/uniprot/P31300 P31300]
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** [http://www.uniprot.org/uniprot/Q43153 Q43153]
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** [http://www.uniprot.org/uniprot/O67507 O67507]
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** [http://www.uniprot.org/uniprot/P47998 P47998]
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** [http://www.uniprot.org/uniprot/Q9V1Q3 Q9V1Q3]
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** [http://www.uniprot.org/uniprot/Q9RW80 Q9RW80]
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** [http://www.uniprot.org/uniprot/P56067 P56067]
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** [http://www.uniprot.org/uniprot/P63873 P63873]
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** [http://www.uniprot.org/uniprot/Q9CI26 Q9CI26]
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** [http://www.uniprot.org/uniprot/Q9ZMW6 Q9ZMW6]
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** [http://www.uniprot.org/uniprot/P45040 P45040]
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** [http://www.uniprot.org/uniprot/Q9WZD3 Q9WZD3]
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** [http://www.uniprot.org/uniprot/Q9CHF0 Q9CHF0]
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** [http://www.uniprot.org/uniprot/P0A534 P0A534]
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** [http://www.uniprot.org/uniprot/P71128 P71128]
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** [http://www.uniprot.org/uniprot/O05393 O05393]
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** [http://www.uniprot.org/uniprot/O34476 O34476]
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** [http://www.uniprot.org/uniprot/Q9JQL6 Q9JQL6]
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** [http://www.uniprot.org/uniprot/P38076 P38076]
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** [http://www.uniprot.org/uniprot/Q7M1J2 Q7M1J2]
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** [http://www.uniprot.org/uniprot/P29848 P29848]
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** [http://www.uniprot.org/uniprot/P32260 P32260]
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** [http://www.uniprot.org/uniprot/Q00834 Q00834]
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** [http://www.uniprot.org/uniprot/Q43317 Q43317]
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** [http://www.uniprot.org/uniprot/P47999 P47999]
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** [http://www.uniprot.org/uniprot/Q43726 Q43726]
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** [http://www.uniprot.org/uniprot/P80608 P80608]
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** [http://www.uniprot.org/uniprot/Q59447 Q59447]
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** [http://www.uniprot.org/uniprot/P53206 P53206]
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** [http://www.uniprot.org/uniprot/P37887 P37887]
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** [http://www.uniprot.org/uniprot/Q59529 Q59529]
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** [http://www.uniprot.org/uniprot/P0A1E3 P0A1E3]
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** [http://www.uniprot.org/uniprot/P0ABK5 P0ABK5]
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** [http://www.uniprot.org/uniprot/P16703 P16703]
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** [http://www.uniprot.org/uniprot/O81154 O81154]
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** [http://www.uniprot.org/uniprot/O81155 O81155]
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** [http://www.uniprot.org/uniprot/O81523 O81523]
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** [http://www.uniprot.org/uniprot/Q93244 Q93244]
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** [http://www.uniprot.org/uniprot/O45679 O45679]
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** [http://www.uniprot.org/uniprot/Q9S2H1 Q9S2H1]
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** [http://www.uniprot.org/uniprot/P87131 P87131]
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** [http://www.uniprot.org/uniprot/Q9XDU7 Q9XDU7]
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** [http://www.uniprot.org/uniprot/Q9UWP0 Q9UWP0]
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** [http://www.uniprot.org/uniprot/O32978 O32978]
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** [http://www.uniprot.org/uniprot/Q9RAS8 Q9RAS8]
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** [http://www.uniprot.org/uniprot/Q9S757 Q9S757]
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** [http://www.uniprot.org/uniprot/Q9S6Z7 Q9S6Z7]
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** [http://www.uniprot.org/uniprot/Q43725 Q43725]
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** [http://www.uniprot.org/uniprot/Q9SMY4 Q9SMY4]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=cysteine_synthase}}
 +
{{#set: common name=cog0031:_cysteine_synthase}}
 +
{{#set: common name=cysteine}}
 +
{{#set: ec number=EC-2.5.1.47}}
 +
{{#set: gene associated=Tiso_gene_819|Tiso_gene_7852|Tiso_gene_17043|Tiso_gene_6110|Tiso_gene_2283|Tiso_gene_12184}}
 +
{{#set: in pathway=CYSTSYN-PWY}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:39, 21 March 2018

Reaction ACSERLY-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • cysteine_synthase
    • cog0031:_cysteine_synthase
    • cysteine
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 O-acetyl-L-serine[c] + 1 hydrogen sulfide[c] <=> 1 H+[c] + 1 L-cysteine[c] + 1 acetate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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