Difference between revisions of "RXN-11351"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_16936 == * left end position: ** 82 * transcription direction: ** POSITIVE * right end position: ** 1881 * centisome position: ** 2.0352445...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7737 RXN-7737] == * direction: ** REVERSIBLE * common name: ** ll-diaminopimelate_chloroplastic...") |
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| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7737 RXN-7737] == |
| − | * | + | * direction: |
| − | + | ** REVERSIBLE | |
| − | + | * common name: | |
| − | ** | + | ** ll-diaminopimelate_chloroplastic |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.6.1.83 EC-2.6.1.83] |
| − | * | + | |
| − | ** 2. | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[2 | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LL-DIAMINOPIMELATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] |
| − | *** | + | * With common name(s): |
| − | ** [[ | + | ** 1 2-oxoglutarate[c] '''+''' 1 L,L-diaminopimelate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 (S)-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] |
| − | == Pathways | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_18833]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | ** Source: [[orthology-synechocystis]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097] | ||
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-synechocystis]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[manual]] | ||
| + | ** Source: [[manual-primary_network]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23988 23988] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07613 R07613] |
| − | {{#set: | + | {{#set: direction=REVERSIBLE}} |
| + | {{#set: common name=ll-diaminopimelate_chloroplastic}} | ||
| + | {{#set: ec number=EC-2.6.1.83}} | ||
| + | {{#set: gene associated=Tiso_gene_18833}} | ||
| + | {{#set: in pathway=PWY-5097}} | ||
| + | {{#set: reconstruction category=orthology|manual|annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 16:39, 21 March 2018
Contents
Reaction RXN-7737
- direction:
- REVERSIBLE
- common name:
- ll-diaminopimelate_chloroplastic
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 2-KETOGLUTARATE[c] + 1 LL-DIAMINOPIMELATE[c] <=> 1 GLT[c] + 1 DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE[c] + 1 PROTON[c] + 1 WATER[c]
- With common name(s):
- 1 2-oxoglutarate[c] + 1 L,L-diaminopimelate[c] <=> 1 L-glutamate[c] + 1 (S)-2,3,4,5-tetrahydrodipicolinate[c] + 1 H+[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_18833
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
