Difference between revisions of "PWY0-1353"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] == * direction: ** LEFT-TO-RIGHT * common name: ** sialate_o-acetylesterase-li...")
 
(Created page with "Category:Gene == Gene Tiso_gene_7955 == * left end position: ** 3777 * transcription direction: ** POSITIVE * right end position: ** 6185 * centisome position: ** 35.39831...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] ==
+
== Gene Tiso_gene_7955 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3777
−
* common name:
+
* transcription direction:
−
** sialate_o-acetylesterase-like_protein
+
** POSITIVE
−
** protein_chloroplastic
+
* right end position:
−
** alpha_beta_hydrolase_fold_protein
+
** 6185
−
** serine_esterase
+
* centisome position:
−
** ORF
+
** 35.39831   
−
** lysophospholipase
+
−
** alpha_beta_hydrolase
+
−
** para-nitrobenzyl_esterase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[RXN-15556]]
−
** 1 [[CPD-10546]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[METOH]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[PROTON]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 methyl (indol-3-yl)acetate[c] '''+''' 1 H2O[c] '''=>''' 1 methanol[c] '''+''' 1 indole-3-acetate[c] '''+''' 1 H+[c]
+
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
−
 
+
** in-silico_annotation
−
== Genes associated with this reaction  ==
+
***ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* [[Tiso_gene_2556]]
+
* [[PWY-7511]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17029]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1922]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_12686]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_19778]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16518]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10066]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4650]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1537]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1538]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_11351]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_4606]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9429]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-6303]], methyl indole-3-acetate interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6303 PWY-6303]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=3777}}
−
{{#set: common name=sialate_o-acetylesterase-like_protein}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=protein_chloroplastic}}
+
{{#set: right end position=6185}}
−
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
+
{{#set: centisome position=35.39831    }}
−
{{#set: common name=serine_esterase}}
+
{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
−
{{#set: common name=ORF}}
+
{{#set: pathway associated=PWY-7511}}
−
{{#set: common name=lysophospholipase}}
+
−
{{#set: common name=alpha_beta_hydrolase}}
+
−
{{#set: common name=para-nitrobenzyl_esterase}}
+
−
{{#set: ec number=EC-3.1.1.1}}
+
−
{{#set: gene associated=Tiso_gene_2556|Tiso_gene_17029|Tiso_gene_1922|Tiso_gene_12686|Tiso_gene_19778|Tiso_gene_16518|Tiso_gene_10066|Tiso_gene_4650|Tiso_gene_1537|Tiso_gene_1538|Tiso_gene_11351|Tiso_gene_4606|Tiso_gene_9429}}
+
−
{{#set: in pathway=PWY-6303}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 17:14, 10 January 2018

Gene Tiso_gene_7955

  • left end position:
    • 3777
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6185
  • centisome position:
    • 35.39831
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY0-1353&oldid=12081"