Difference between revisions of "Tiso gene 14257"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2.1...")
(Created page with "Category:Gene == Gene Tiso_gene_7210 == * right end position: ** 3946 * transcription direction: ** POSITIVE * left end position: ** 34 * centisome position: ** 0.1213419...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] ==
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== Gene Tiso_gene_7210 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 3946
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.2.1.116 EC-4.2.1.116]
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** POSITIVE
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* left end position:
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** 34
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* centisome position:
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** 0.1213419   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[ACRYLYL-COA]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 3-hydroxypropanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 acryloyl-CoA[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5857]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_16703]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_14257]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3941]], &beta;-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3941 PWY-3941]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
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** '''8''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3946}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26518 26518]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=34}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03045 R03045]
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{{#set: centisome position=0.1213419    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=ATPASE-RXN}}
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{{#set: ec number=EC-4.2.1.116}}
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{{#set: gene associated=Tiso_gene_5857|Tiso_gene_16703|Tiso_gene_14257}}
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{{#set: in pathway=PWY-7574|PWY-3941|PWY-5743|PWY-5789|PWY-5744}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:40, 21 March 2018

Gene Tiso_gene_7210

  • right end position:
    • 3946
  • transcription direction:
    • POSITIVE
  • left end position:
    • 34
  • centisome position:
    • 0.1213419
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14257&oldid=35570"