Difference between revisions of "CPD-8574"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12440 RXN-12440] == * direction: ** LEFT-TO-RIGHT * common name: ** ascorbate_peroxidase * ec n...")
(Created page with "Category:Gene == Gene Tiso_gene_10894 == * right end position: ** 8130 * transcription direction: ** POSITIVE * left end position: ** 6125 * centisome position: ** 74.5315...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12440 RXN-12440] ==
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== Gene Tiso_gene_10894 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8130
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* common name:
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* transcription direction:
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** ascorbate_peroxidase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.11.1.11 EC-1.11.1.11]
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** 6125
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* centisome position:
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** 74.53152   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLYOXII-RXN]]
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** 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 2 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 2 L-ascorbate[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 H+[c] '''=>''' 1 L-ascorbate[c] '''+''' 1 L-dehydro-ascorbate[c] '''+''' 2 H2O[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-7919]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15962]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16028]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5435]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6960]], L-ascorbate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6960 PWY-6960]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6959]], L-ascorbate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6959 PWY-6959]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6961 PWY-6961]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-5386]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8130}}
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{{#set: common name=ascorbate_peroxidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.11.1.11}}
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{{#set: left end position=6125}}
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{{#set: gene associated=Tiso_gene_15962|Tiso_gene_16028|Tiso_gene_5435}}
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{{#set: centisome position=74.53152    }}
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{{#set: in pathway=PWY-6960|PWY-6959|PWY-6961}}
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{{#set: reaction associated=GLYOXII-RXN|RXN-7919}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-5386}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:41, 21 March 2018

Gene Tiso_gene_10894

  • right end position:
    • 8130
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6125
  • centisome position:
    • 74.53152
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-8574&oldid=35612"