Difference between revisions of "Tiso gene 8434"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10779 RXN-10779] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10773 RXN-10773] == * direction: ** LEFT-TO-RIGHT * common name: ** low_quality_protein:_beta-g...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10779 RXN-10779] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10773 RXN-10773] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
 +
** ORF
 +
** beta-glucosidase-like_chloroplastic
 +
** beta_glucosidase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''+''' 1 [[CYS]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-11670]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CELLOBIOSE]][c] '''=>''' 2 [[Glucopyranose]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 5-hydroxyindole acetaldehyde[c] '''+''' 1 L-cysteine[c] '''<=>''' 1 H2O[c] '''+''' 1 5-hydroxyindole thiazolidine carboxylate[c]
+
** 1 H2O[c] '''+''' 1 &beta;-D-cellobiose[c] '''=>''' 2 D-glucopyranose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_10001]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2344]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6497]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6187]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_2843]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5836]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6007]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15067]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6188]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8669]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13306]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13305]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3467]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15066]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
+
* [[PWY-6788]], cellulose degradation II (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6788 PWY-6788]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: in pathway=PWY-6313}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30682 30682]
−
{{#set: reconstruction category=annotation}}
+
* LIGAND-RXN:
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00026 R00026]
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=beta-glucosidase-like_chloroplastic}}
 +
{{#set: common name=beta_glucosidase}}
 +
{{#set: ec number=EC-3.2.1.21}}
 +
{{#set: gene associated=Tiso_gene_10001|Tiso_gene_2344|Tiso_gene_6497|Tiso_gene_6187|Tiso_gene_2843|Tiso_gene_5836|Tiso_gene_6007|Tiso_gene_15067|Tiso_gene_6188|Tiso_gene_8669|Tiso_gene_13306|Tiso_gene_13305|Tiso_gene_3467|Tiso_gene_15066}}
 +
{{#set: in pathway=PWY-6788}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:41, 21 March 2018

Reaction RXN-10773

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • low_quality_protein:_beta-glucosidase-like_chloroplastic-like
    • ORF
    • beta-glucosidase-like_chloroplastic
    • beta_glucosidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 β-D-cellobiose[c] => 2 D-glucopyranose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6788, cellulose degradation II (fungi): PWY-6788
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






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