Difference between revisions of "PWY-6113"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SOLANESYL-PYROPHOSPHATE SOLANESYL-PYROPHOSPHATE] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16138 RXN-16138] == * direction: ** LEFT-TO-RIGHT * common name: ** abhydrolase_domain-containi...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SOLANESYL-PYROPHOSPHATE SOLANESYL-PYROPHOSPHATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16138 RXN-16138] ==
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* smiles:
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* direction:
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=IVLBHBFTRNVIAP-MEGGAXOGSA-K
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* common name:
 
* common name:
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** all-trans-nonaprenyl diphosphate
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** abhydrolase_domain-containing_protein_4-like
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* molecular weight:
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** ORF
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** 788.015   
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** solanyl pyrophosphate
 
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** solanesyl diphosphate
 
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** (hydroxy-(3,7,11,15,19,23,27,31,35-nonamethylhexatriaconta-2,6,10,14,18,22,26,30,34-nonaenoxy)phosphinoyl)oxyphosphonic acid
 
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** solanesyl pyrophosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[2.5.1.39-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-17355]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Glycerolipids]][c] '''+''' 1 [[CPD-10244]][c]
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* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
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* With common name(s):
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* [[RXN-11486]]
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** 1 a [glycerolipid]-docosahexaenoate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 a glycerolipid[c] '''+''' 1 docosahexaenoate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15047]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12959]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12960]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15046]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY66-397]], resolvin D biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-397 PWY66-397]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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* [[PWY66-395]], aspirin triggered resolvin D biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-395 PWY66-395]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244603 25244603]
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{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
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* CHEBI:
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{{#set: common name=ORF}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58391 58391]
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{{#set: ec number=EC-3.1.1.4}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_15047|Tiso_gene_12959|Tiso_gene_12960|Tiso_gene_15046}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04145 C04145]
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{{#set: in pathway=PWY66-397|PWY66-395}}
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=IVLBHBFTRNVIAP-MEGGAXOGSA-K}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=all-trans-nonaprenyl diphosphate}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: molecular weight=788.015    }}
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{{#set: common name=solanyl pyrophosphate|solanesyl diphosphate|(hydroxy-(3,7,11,15,19,23,27,31,35-nonamethylhexatriaconta-2,6,10,14,18,22,26,30,34-nonaenoxy)phosphinoyl)oxyphosphonic acid|solanesyl pyrophosphate}}
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{{#set: consumed by=2.5.1.39-RXN}}
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{{#set: produced by=TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN|RXN-11486}}
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Revision as of 16:15, 10 January 2018

Reaction RXN-16138

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • abhydrolase_domain-containing_protein_4-like
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a [glycerolipid]-docosahexaenoate[c] + 1 H2O[c] => 1 H+[c] + 1 a glycerolipid[c] + 1 docosahexaenoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-397, resolvin D biosynthesis: PWY66-397
    • 1 reactions found over 11 reactions in the full pathway
  • PWY66-395, aspirin triggered resolvin D biosynthesis: PWY66-395
    • 1 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6113&oldid=12103"