Difference between revisions of "RXN-17892"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_1611 == * left end position: ** 11099 * transcription direction: ** NEGATIVE * right end position: ** 22757 * centisome position: ** 48.488...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-_d...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_1611 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] ==
−
* left end position:
+
* direction:
−
** 11099
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** acyl-_dehydrogenase
−
* right end position:
+
** Acyl-CoA dehydrogenase
−
** 22757
+
** acyl-CoA_dehydrogenase
−
* centisome position:
+
* ec number:
−
** 48.488422   
+
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 
* Synonym(s):
 
* Synonym(s):
 +
** fatty acyl coenzyme A dehydrogenase
 +
** acyl coenzyme A dehydrogenase
 +
** fatty-acyl-CoA dehydrogenase
 +
** general acyl CoA dehydrogenase
 +
** medium-chain acyl-coenzyme A dehydrogenase
 +
** long-chain acyl coenzyme A dehydrogenase
 +
** long-chain acyl-CoA dehydrogenase
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ATPASE-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
−
***ec-number
+
* With common name(s):
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** 1 H+[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 a trans-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
−
** in-silico_annotation
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
* [[RXN-12195]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_5449]]
−
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
−
* [[RXN-12196]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_16631]]
−
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
−
* [[RXN0-5462]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_6295]]
−
***ec-number
+
** Source: [[orthology-esiliculosus]]
−
== Pathways associated ==
+
* Gene: [[Tiso_gene_8272]]
−
* [[PWY-7184]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-7198]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[PWY-6545]]
+
** Source: [[orthology-esiliculosus]]
−
* [[PWY-7210]]
+
* Gene: [[Tiso_gene_14511]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10643]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8271]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_7447]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_883]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6475]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_16113]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=11099}}
+
* UNIPROT:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.uniprot.org/uniprot/P16219 P16219]
−
{{#set: right end position=22757}}
+
** [http://www.uniprot.org/uniprot/P45952 P45952]
−
{{#set: centisome position=48.488422    }}
+
** [http://www.uniprot.org/uniprot/P15651 P15651]
−
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
** [http://www.uniprot.org/uniprot/P11310 P11310]
−
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
+
** [http://www.uniprot.org/uniprot/P08503 P08503]
 +
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
 +
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
 +
** [http://www.uniprot.org/uniprot/P45867 P45867]
 +
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
 +
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
 +
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=acyl-_dehydrogenase}}
 +
{{#set: common name=Acyl-CoA dehydrogenase}}
 +
{{#set: common name=acyl-CoA_dehydrogenase}}
 +
{{#set: ec number=EC-1.3.8}}
 +
{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
 +
{{#set: gene associated=Tiso_gene_5449|Tiso_gene_16631|Tiso_gene_6295|Tiso_gene_8272|Tiso_gene_14511|Tiso_gene_10643|Tiso_gene_8271|Tiso_gene_7447|Tiso_gene_883|Tiso_gene_6475|Tiso_gene_16113}}
 +
{{#set: in pathway=FAO-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:42, 21 March 2018

Reaction ACYLCOADEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-_dehydrogenase
    • Acyl-CoA dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):
    • fatty acyl coenzyme A dehydrogenase
    • acyl coenzyme A dehydrogenase
    • fatty-acyl-CoA dehydrogenase
    • general acyl CoA dehydrogenase
    • medium-chain acyl-coenzyme A dehydrogenase
    • long-chain acyl coenzyme A dehydrogenase
    • long-chain acyl-CoA dehydrogenase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17892&oldid=35767"