Difference between revisions of "RXN-10655"

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(Created page with "Category:Gene == Gene Tiso_gene_17309 == * left end position: ** 1715 * transcription direction: ** NEGATIVE * right end position: ** 3727 * centisome position: ** 45.2029...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** adeno...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17309 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] ==
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* left end position:
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* direction:
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** 1715
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** adenosylmethionine-8-amino-7-oxononanoate_aminotransferase
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* right end position:
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* ec number:
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** 3727
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** [http://enzyme.expasy.org/EC/6.3.3.3 EC-6.3.3.3]
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* centisome position:
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** 45.202953   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACID-PHOSPHATASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[DETHIOBIOTIN]][c]
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***ec-number
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* With common name(s):
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* [[RXN-5822]]
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** 1 CO2[c] '''+''' 1 7,8-diaminopelargonate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 3 H+[c] '''+''' 1 dethiobiotin[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6348]]
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* Gene: [[Tiso_gene_11635]]
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* [[PWY-5083]]
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** Source: [[annotation-in-silico_annotation]]
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* [[NADPHOS-DEPHOS-PWY]]
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*** Assignment: EC-NUMBER
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* [[NAD-BIOSYNTHESIS-II]]
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== Pathways ==
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1715}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]
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{{#set: right end position=3727}}
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* LIGAND-RXN:
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{{#set: centisome position=45.202953    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
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* UNIPROT:
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{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]
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** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]
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** [http://www.uniprot.org/uniprot/P46397 P46397]
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** [http://www.uniprot.org/uniprot/P22818 P22818]
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** [http://www.uniprot.org/uniprot/P13000 P13000]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=adenosylmethionine-8-amino-7-oxononanoate_aminotransferase}}
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{{#set: ec number=EC-6.3.3.3}}
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{{#set: gene associated=Tiso_gene_11635}}
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{{#set: in pathway=PWY0-1507|PWY-7380}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:45, 21 March 2018

Reaction DETHIOBIOTIN-SYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • adenosylmethionine-8-amino-7-oxononanoate_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II: PWY-7380
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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