Difference between revisions of "Tiso gene 12148"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDO-8PSYNTH-RXN KDO-8PSYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** bifunctional_kd...")
(Created page with "Category:Gene == Gene Tiso_gene_6903 == * right end position: ** 2011 * transcription direction: ** POSITIVE * left end position: ** 1397 * centisome position: ** 11.94119...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDO-8PSYNTH-RXN KDO-8PSYNTH-RXN] ==
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== Gene Tiso_gene_6903 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 2011
* common name:
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* transcription direction:
** bifunctional_kdo_8-p_synthase_dtdp-6-deoxy-l-hexose_3-o-methyltransferase
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** POSITIVE
* ec number:
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* left end position:
** [http://enzyme.expasy.org/EC/2.5.1.55 EC-2.5.1.55]
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** 1397
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* centisome position:
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** 11.941192   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[RXN-15556]]
** 1 [[CPD-18118]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[KDO-8P]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: ec-number
** 1 D-arabinofuranose 5-phosphate[c] '''+''' 1 H2O[c] '''+''' 1 phosphoenolpyruvate[c] '''=>''' 1 phosphate[c] '''+''' 1 3-deoxy-D-manno-octulosonate 8-phosphate[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1350]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7674]], CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7674 PWY-7674]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-1269]], CMP-3-deoxy-D-manno-octulosonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1269 PWY-1269]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
 +
== Pathways associated ==
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* [[PWY-7511]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: right end position=2011}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14053 14053]
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{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
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{{#set: left end position=1397}}
** [http://www.genome.jp/dbget-bin/www_bget?R03254 R03254]
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{{#set: centisome position=11.941192    }}
* UNIPROT:
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
** [http://www.uniprot.org/uniprot/Q9PIB8 Q9PIB8]
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{{#set: pathway associated=PWY-7511}}
** [http://www.uniprot.org/uniprot/P45251 P45251]
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** [http://www.uniprot.org/uniprot/Q9JU48 Q9JU48]
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** [http://www.uniprot.org/uniprot/P0A715 P0A715]
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** [http://www.uniprot.org/uniprot/O50044 O50044]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=bifunctional_kdo_8-p_synthase_dtdp-6-deoxy-l-hexose_3-o-methyltransferase}}
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{{#set: ec number=EC-2.5.1.55}}
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{{#set: gene associated=Tiso_gene_1350|Tiso_gene_20348}}
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{{#set: in pathway=PWY-7674|PWY-1269}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:47, 21 March 2018

Gene Tiso_gene_6903

  • right end position:
    • 2011
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1397
  • centisome position:
    • 11.941192
  • Synonym(s):

Reactions associated

Pathways associated

External links