Difference between revisions of "RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14201 RXN-14201] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA-CARBOXY-RXN PROPIONYL-COA-CARBOXY-RXN] == * direction: ** REVERSIBLE * ec number: **...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14201 RXN-14201] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA-CARBOXY-RXN PROPIONYL-COA-CARBOXY-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** ORF
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
+
** [http://enzyme.expasy.org/EC/6.4.1.3 EC-6.4.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GTP]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 2 [[Pi]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 GTP[c] '''+''' 2 H2O[c] '''=>''' 1 GMP[c] '''+''' 2 phosphate[c] '''+''' 2 H+[c]
+
** 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 propanoyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 (S)-methylmalonyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_20236]]
+
* Gene: [[Tiso_gene_5029]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_12899]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
 +
** '''7''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 +
** '''8''' reactions found over '''16''' reactions in the full pathway
 +
* [[PROPIONMET-PWY]], propanoyl CoA degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
 +
** '''11''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=ORF}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23720 23720]
−
{{#set: ec number=EC-3.6.1.5}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859]
−
{{#set: in pathway=}}
+
* UNIPROT:
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0]
−
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
+
** [http://www.uniprot.org/uniprot/P07633 P07633]
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P05165 P05165]
 +
** [http://www.uniprot.org/uniprot/Q06101 Q06101]
 +
** [http://www.uniprot.org/uniprot/Q20676 Q20676]
 +
** [http://www.uniprot.org/uniprot/O24789 O24789]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-6.4.1.3}}
 +
{{#set: gene associated=Tiso_gene_5029}}
 +
{{#set: in pathway=PWY-5743|PWY-7384|PWY-5789|PROPIONMET-PWY|PWY-6728}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 15:48, 21 March 2018

Reaction PROPIONYL-COA-CARBOXY-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 hydrogencarbonate[c] + 1 propanoyl-CoA[c] <=> 1 H+[c] + 1 ADP[c] + 1 phosphate[c] + 1 (S)-methylmalonyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial): PWY-7384
    • 7 reactions found over 12 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
    • 8 reactions found over 16 reactions in the full pathway
  • PROPIONMET-PWY, propanoyl CoA degradation I: PROPIONMET-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6728, methylaspartate cycle: PWY-6728
    • 11 reactions found over 18 reactions in the full pathway

Reconstruction information

External links




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