Difference between revisions of "CPD-190"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-PEROXIDASE-RXN GLUTATHIONE-PEROXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16000 RXN-16000] == * direction: ** LEFT-TO-RIGHT * common name: ** NADP-dependent L-serine/L-a...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-PEROXIDASE-RXN GLUTATHIONE-PEROXIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16000 RXN-16000] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glutathione_peroxidase
+
** NADP-dependent L-serine/L-allo-threonine dehydrogenase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.11.1.9 EC-1.11.1.9]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[GLUTATHIONE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[OXIDIZED-GLUTATHIONE]][c]
+
** 1 [[NADP]][c] '''+''' 1 [[L-ALLO-THREONINE]][c] '''=>''' 1 [[AMINO-OXOBUT]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 glutathione[c] '''+''' 1 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 1 glutathione disulfide[c]
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** 1 NADP+[c] '''+''' 1 L-allo-threonine[c] '''=>''' 1 L-2-amino-3-oxobutanoate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6679]]
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* Gene: [[Tiso_gene_16359]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[Tiso_gene_8644]]
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−
** EXPERIMENTAL_ANNOTATION
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−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1377]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6680]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-4081]], glutathione-peroxide redox reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4081 PWY-4081]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16833 16833]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00274 R00274]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q7M355 Q7M355]
 
−
** [http://www.uniprot.org/uniprot/P18283 P18283]
 
−
** [http://www.uniprot.org/uniprot/P46412 P46412]
 
−
** [http://www.uniprot.org/uniprot/Q64625 Q64625]
 
−
** [http://www.uniprot.org/uniprot/P0A0T5 P0A0T5]
 
−
** [http://www.uniprot.org/uniprot/P0A0T4 P0A0T4]
 
−
** [http://www.uniprot.org/uniprot/P22352 P22352]
 
−
** [http://www.uniprot.org/uniprot/P23764 P23764]
 
−
** [http://www.uniprot.org/uniprot/P37141 P37141]
 
−
** [http://www.uniprot.org/uniprot/P00435 P00435]
 
−
** [http://www.uniprot.org/uniprot/P07203 P07203]
 
−
** [http://www.uniprot.org/uniprot/P11352 P11352]
 
−
** [http://www.uniprot.org/uniprot/P04041 P04041]
 
−
** [http://www.uniprot.org/uniprot/P11909 P11909]
 
−
** [http://www.uniprot.org/uniprot/P30708 P30708]
 
−
** [http://www.uniprot.org/uniprot/P67878 P67878]
 
−
** [http://www.uniprot.org/uniprot/P28714 P28714]
 
−
** [http://www.uniprot.org/uniprot/P30710 P30710]
 
−
** [http://www.uniprot.org/uniprot/Q06652 Q06652]
 
−
** [http://www.uniprot.org/uniprot/P38143 P38143]
 
−
** [http://www.uniprot.org/uniprot/P40581 P40581]
 
−
** [http://www.uniprot.org/uniprot/Q38703 Q38703]
 
−
** [http://www.uniprot.org/uniprot/P35666 P35666]
 
−
** [http://www.uniprot.org/uniprot/P67877 P67877]
 
−
** [http://www.uniprot.org/uniprot/Q7M448 Q7M448]
 
−
** [http://www.uniprot.org/uniprot/P73824 P73824]
 
−
** [http://www.uniprot.org/uniprot/Q9SZ54 Q9SZ54]
 
−
** [http://www.uniprot.org/uniprot/O24296 O24296]
 
−
** [http://www.uniprot.org/uniprot/O24032 O24032]
 
−
** [http://www.uniprot.org/uniprot/O22448 O22448]
 
−
** [http://www.uniprot.org/uniprot/O23968 O23968]
 
−
** [http://www.uniprot.org/uniprot/O23970 O23970]
 
−
** [http://www.uniprot.org/uniprot/Q98234 Q98234]
 
−
** [http://www.uniprot.org/uniprot/O59858 O59858]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=glutathione_peroxidase}}
+
{{#set: common name=NADP-dependent L-serine/L-allo-threonine dehydrogenase}}
−
{{#set: ec number=EC-1.11.1.9}}
+
{{#set: gene associated=Tiso_gene_16359}}
−
{{#set: gene associated=Tiso_gene_6679|Tiso_gene_8644|Tiso_gene_1377|Tiso_gene_6680}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=DETOX1-PWY-1|PWY-4081}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 15:49, 21 March 2018

Reaction RXN-16000

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NADP-dependent L-serine/L-allo-threonine dehydrogenase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-190&oldid=36571"