Difference between revisions of "Tiso gene 20384"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.123-RXN 2.4.1.123-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18208 RXN-18208] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydrogenas...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.123-RXN 2.4.1.123-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18208 RXN-18208] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
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** REVERSIBLE
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/2.4.1.123 EC-2.4.1.123]
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** 3-isopropylmalate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[MYO-INOSITOL]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-458]][c]
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** 1 [[CPDQT-36]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-19491]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 myo-inositol[c] '''+''' 1 UDP-&alpha;-D-galactose[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 galactinol[c]
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** 1 3-(3'-methylthio)propylmalate[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 3-isopropyl-6-(methylthio)-2-oxohexanoate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_18913]]
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* Gene: [[Tiso_gene_2920]]
** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6524]], lychnose and isolychnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6524 PWY-6524]
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* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450]
** '''1''' reactions found over '''4''' reactions in the full pathway
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** '''10''' reactions found over '''30''' reactions in the full pathway
* [[PWY-6525]], stellariose and mediose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6525 PWY-6525]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5337]], stachyose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5337 PWY-5337]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
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* Category: [[annotation]]
** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
*** Tool: [[pantograph]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=REVERSIBLE}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12464 12464]
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{{#set: common name=3-isopropylmalate dehydrogenase}}
* LIGAND-RXN:
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{{#set: gene associated=Tiso_gene_2920}}
** [http://www.genome.jp/dbget-bin/www_bget?R01192 R01192]
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{{#set: in pathway=PWYQT-4450}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reconstruction category=annotation}}
{{#set: ec number=EC-2.4.1.123}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
{{#set: gene associated=Tiso_gene_18913}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: in pathway=PWY-6524|PWY-6525|PWY-5337}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:50, 21 March 2018

Reaction RXN-18208

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-(3'-methylthio)propylmalate[c] + 1 NAD+[c] <=> 1 NADH[c] + 1 3-isopropyl-6-(methylthio)-2-oxohexanoate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYQT-4450, aliphatic glucosinolate biosynthesis, side chain elongation cycle: PWYQT-4450
    • 10 reactions found over 30 reactions in the full pathway

Reconstruction information

External links