Difference between revisions of "RXN-12508"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17918 RXN-17918] == * direction: ** LEFT-TO-RIGHT * common name: ** dna_ligase_mrna_capping_enz...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17918 RXN-17918] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** dna_ligase_mrna_capping_enzyme | ||
| + | ** dna_ligase | ||
| + | ** ORF | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a 5'-phospho-[DNA][c] '''+''' 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] '''+''' 2 H+[c] '''=>''' 1 a 5'-(5'-diphosphoadenosine)-[DNA][c] '''+''' 1 a [DNA ligase]-L-lysine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_11251]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_14249]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_14250]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_12142]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_6743]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_3498]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| − | * Category: [[ | + | * Category: [[annotation]] |
| − | ** Source: [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Tool: [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
| − | |||
| − | |||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=dna_ligase_mrna_capping_enzyme}} |
| − | {{#set: in pathway= | + | {{#set: common name=dna_ligase}} |
| − | {{#set: reconstruction category= | + | {{#set: common name=ORF}} |
| − | {{#set: reconstruction source= | + | {{#set: gene associated=Tiso_gene_11251|Tiso_gene_14249|Tiso_gene_14250|Tiso_gene_12142|Tiso_gene_6743|Tiso_gene_3498}} |
| − | {{#set: reconstruction tool= | + | {{#set: in pathway=}} |
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Revision as of 15:53, 21 March 2018
Contents
Reaction RXN-17918
- direction:
- LEFT-TO-RIGHT
- common name:
- dna_ligase_mrna_capping_enzyme
- dna_ligase
- ORF
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 5-Phospho-terminated-DNAs[c] + 1 DNA-Ligase-L-lysine-adenylate[c] + 2 PROTON[c] => 1 A-5-prime-PP-5-prime-DNA[c] + 1 DNA-Ligase-L-lysine[c]
- With common name(s):
- 1 a 5'-phospho-[DNA][c] + 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] + 2 H+[c] => 1 a 5'-(5'-diphosphoadenosine)-[DNA][c] + 1 a [DNA ligase]-L-lysine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11251
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14249
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14250
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_12142
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6743
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_3498
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
