Difference between revisions of "Tiso gene 6004"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15834 CPD-15834] == * smiles: ** CC(=CCCC(C)=CCCC(=CCCC(C)=CCC1(=C(O)C(C)=C(C)C(O)=C1))C)C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALA-RXN TREHALA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** glycoside_hydrol...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15834 CPD-15834] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALA-RXN TREHALA-RXN] ==
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* smiles:
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* direction:
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** CC(=CCCC(C)=CCCC(=CCCC(C)=CCC1(=C(O)C(C)=C(C)C(O)=C1))C)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=QFMVWSPTQOCGTB-TUZVQDLTSA-N
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* common name:
 
* common name:
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** 2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol
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** ORF
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* molecular weight:
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** glycoside_hydrolase_family_37
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** 410.639   
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.28 EC-3.2.1.28]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-14917]]
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** 1 [[TREHALOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLC]][c] '''+''' 1 [[ALPHA-GLUCOSE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 α,α-trehalose[c] '''+''' 1 H2O[c] '''=>''' 1 β-D-glucopyranose[c] '''+''' 1 α-D-glucopyranose[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7688]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_13748]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-1466]], trehalose degradation VI (periplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1466 PWY0-1466]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?C20738 C20738]
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** [http://www.genome.jp/dbget-bin/www_bget?R00010 R00010]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=75412 75412]
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** [http://www.uniprot.org/uniprot/P19813 P19813]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/O43280 O43280]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5327035 5327035]
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** [http://www.uniprot.org/uniprot/P13482 P13482]
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{{#set: smiles=CC(=CCCC(C)=CCCC(=CCCC(C)=CCC1(=C(O)C(C)=C(C)C(O)=C1))C)C}}
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** [http://www.uniprot.org/uniprot/P32359 P32359]
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{{#set: inchi key=InChIKey=QFMVWSPTQOCGTB-TUZVQDLTSA-N}}
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** [http://www.uniprot.org/uniprot/P32358 P32358]
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{{#set: common name=2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol}}
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** [http://www.uniprot.org/uniprot/P35172 P35172]
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{{#set: molecular weight=410.639    }}
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** [http://www.uniprot.org/uniprot/P62601 P62601]
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{{#set: produced by=RXN-14917}}
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** [http://www.uniprot.org/uniprot/P32356 P32356]
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** [http://www.uniprot.org/uniprot/P48016 P48016]
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** [http://www.uniprot.org/uniprot/P78922 P78922]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=glycoside_hydrolase_family_37}}
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{{#set: ec number=EC-3.2.1.28}}
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{{#set: gene associated=Tiso_gene_7688|Tiso_gene_13748}}
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{{#set: in pathway=PWY0-1182|PWY0-1466}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:57, 21 March 2018

Reaction TREHALA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • glycoside_hydrolase_family_37
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α,α-trehalose[c] + 1 H2O[c] => 1 β-D-glucopyranose[c] + 1 α-D-glucopyranose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1182, trehalose degradation II (trehalase): PWY0-1182
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-1466, trehalose degradation VI (periplasmic): PWY0-1466
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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