Difference between revisions of "MRNAs-With-PolyA-Tails"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-PWY RIBOKIN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10781 RXN-10781] == * direction: ** LEFT-TO-RIGHT * common name: ** 5-hydroxytryptophol dehydro...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-PWY RIBOKIN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10781 RXN-10781] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* common name:
 
* common name:
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** ribose degradation
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** 5-hydroxytryptophol dehydrogenase
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** polyketide_synthase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** ribose catabolism
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''2''' reaction(s) found
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* With identifiers:
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** [[RXN-14904]]
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** 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''=>''' 1 [[CPD-11671]][c] '''+''' 1 [[NAD]][c]
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** [[RIBOKIN-RXN]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 5-hydroxyindole acetaldehyde[c] '''=>''' 1 5-hydroxytryptophol[c] '''+''' 1 NAD+[c]
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* '''1''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5304 RXN0-5304]
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== Genes associated with this reaction ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7649]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6562]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6563]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5425]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5424]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=RIBOKIN-PWY RIBOKIN-PWY]
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{{#set: common name=5-hydroxytryptophol dehydrogenase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=polyketide_synthase}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=ORF}}
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{{#set: common name=ribose degradation}}
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{{#set: ec number=EC-1.1.1.1}}
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{{#set: common name=ribose catabolism}}
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{{#set: gene associated=Tiso_gene_7649|Tiso_gene_6562|Tiso_gene_6563|Tiso_gene_5425|Tiso_gene_5424}}
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{{#set: reaction found=2}}
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{{#set: in pathway=PWY-6313}}
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{{#set: reaction not found=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:17, 10 January 2018

Reaction RXN-10781

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5-hydroxytryptophol dehydrogenase
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6313, serotonin degradation: PWY-6313
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=MRNAs-With-PolyA-Tails&oldid=12299"