Difference between revisions of "PPGPPSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.23-RXN 1.3.99.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** carotenoid_isomeras...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12541 RXN-12541] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.23-RXN 1.3.99.23-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12541 RXN-12541] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** carotenoid_isomerase
 
** carotene_isomerase
 
** fad_nad_-binding_oxidoreductase_domain-containing_protein
 
** carotenoid_isomerase-like_protein
 
** all-trans-_-dihydroretinol_saturase
 
** ORF
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.3.99.23 EC-1.3.99.23]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[Donor-H2]][c] '''+''' 1 [[CPD-13524]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[CPD-7247]][c]
+
** 2 [[FE+2]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[FE+3]][c] '''+''' 2 [[SUPER-OXIDE]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a reduced electron acceptor[c] '''+''' 1 all-trans-retinol[c] '''=>''' 1 an oxidized electron acceptor[c] '''+''' 1 all-trans-13,14-dihydroretinol[c]
+
** 2 Fe2+[c] '''+''' 2 oxygen[c] '''=>''' 2 Fe3+[c] '''+''' 2 superoxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_16795]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_9534]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_917]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_3092]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_13369]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_13367]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_16794]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6854]], ethylene biosynthesis III (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6854 PWY-6854]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19193 19193]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07163 R07163]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=carotenoid_isomerase}}
+
{{#set: in pathway=PWY-6854}}
{{#set: common name=carotene_isomerase}}
+
{{#set: common name=fad_nad_-binding_oxidoreductase_domain-containing_protein}}
+
{{#set: common name=carotenoid_isomerase-like_protein}}
+
{{#set: common name=all-trans-_-dihydroretinol_saturase}}
+
{{#set: common name=ORF}}
+
{{#set: ec number=EC-1.3.99.23}}
+
{{#set: gene associated=Tiso_gene_16795|Tiso_gene_9534|Tiso_gene_917|Tiso_gene_3092|Tiso_gene_13369|Tiso_gene_13367|Tiso_gene_16794}}
+
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:59, 21 March 2018

Reaction RXN-12541

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-6854, ethylene biosynthesis III (microbes): PWY-6854
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links