Difference between revisions of "RXN0-901"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8032 RXN-8032] == * direction: ** REVERSIBLE * common name: ** 3-ketopimelyl-CoA thiolase * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_6901 == * right end position: ** 7976 * transcription direction: ** POSITIVE * left end position: ** 2128 * centisome position: ** 18.18958...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8032 RXN-8032] ==
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== Gene Tiso_gene_6901 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 7976
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* common name:
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* transcription direction:
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** 3-ketopimelyl-CoA thiolase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
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** 2128
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* centisome position:
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** 18.189589   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15556]]
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** 1 [[CO-A]][c] '''+''' 1 [[3-OXOPIMELOYL-COA]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[GLUTARYL-COA]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 coenzyme A[c] '''+''' 1 3-oxopimeloyl-CoA[c] '''<=>''' 1 acetyl-CoA[c] '''+''' 1 glutaryl-CoA[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_7195]]
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* [[PWY-7511]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[CENTBENZCOA-PWY]], benzoyl-CoA degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=CENTBENZCOA-PWY CENTBENZCOA-PWY]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
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** '''5''' reactions found over '''17''' reactions in the full pathway
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* [[P321-PWY]], benzoyl-CoA degradation III (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P321-PWY P321-PWY]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=7976}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05586 R05586]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=2128}}
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{{#set: common name=3-ketopimelyl-CoA thiolase}}
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{{#set: centisome position=18.189589    }}
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{{#set: ec number=EC-2.3.1}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: gene associated=Tiso_gene_7195}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: in pathway=CENTBENZCOA-PWY|PWY-7401|P321-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:00, 21 March 2018

Gene Tiso_gene_6901

  • right end position:
    • 7976
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2128
  • centisome position:
    • 18.189589
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-901&oldid=37979"