Difference between revisions of "Tiso gene 5733"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGTD DGTD] == * direction: ** LEFT-TO-RIGHT * common name: ** 2'-Deoxyguanosine 5'-triphosphate dip...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-isopropylmalate dehydroge...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGTD DGTD] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 2'-Deoxyguanosine 5'-triphosphate diphosphohydrolase
+
** 3-isopropylmalate dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.85 EC-1.1.1.85]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[WATER]][c] '''+''' 1.0 [[DGTP]][c] '''=>''' 1.0 [[PROTON]][c] '''+''' 1.0 [[DGMP]][c] '''+''' 1.0 [[PPI]][c]
+
** 1 [[CPD-1130]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-3618]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O[c] '''+''' 1.0 dGTP[c] '''=>''' 1.0 H+[c] '''+''' 1.0 dGMP[c] '''+''' 1.0 diphosphate[c]
+
** 1 3-ethylmalate[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 2-oxovalerate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18793]]
+
* Gene: [[Tiso_gene_2920]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2'-Deoxyguanosine 5'-triphosphate diphosphohydrolase}}
+
{{#set: common name=3-isopropylmalate dehydrogenase}}
−
{{#set: gene associated=Tiso_gene_18793}}
+
{{#set: ec number=EC-1.1.1.85}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_2920}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-7396}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:00, 21 March 2018

Reaction RXN-14986

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-isopropylmalate dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-ethylmalate[c] + 1 NAD+[c] => 1 NADH[c] + 1 2-oxovalerate[c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7396, butanol and isobutanol biosynthesis (engineered): PWY-7396
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5733&oldid=37981"