Difference between revisions of "CPD-611"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.16.4-RXN 3.4.16.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lactamase * ec n...")
(Created page with "Category:Gene == Gene Tiso_gene_599 == * right end position: ** 18774 * transcription direction: ** POSITIVE * left end position: ** 16837 * centisome position: ** 54.1191...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.16.4-RXN 3.4.16.4-RXN] ==
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== Gene Tiso_gene_599 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 18774
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* common name:
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* transcription direction:
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** beta-lactamase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
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** 16837
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* centisome position:
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** 54.11912   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[MALTODEXGLUCOSID-RXN]]
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** 1 [[NAcMur-Peptide-NAcGlc-Undecaprenols]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NAcMur-4Peptide-NAcGlc-Undecaprenols]][c] '''+''' 1 [[D-ALANINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a lipid II[c] '''+''' 1 H2O[c] '''=>''' 1 a N-acetylglucosamine--N-acetylmuramyl-(tetrapeptide) pyrophosphoryl-undecaprenol[c] '''+''' 1 D-alanine[c]
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* Reaction: [[RXN-14281]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14282]]
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* [[Tiso_gene_18870]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: automated-name-match
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***EC-NUMBER
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* Reaction: [[RXN-14283]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* Category: [[annotation]]
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* Reaction: [[RXN-15910]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5183]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-842]]
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* [[GLYCOCAT-PWY]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: right end position=18774}}
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** [http://www.uniprot.org/uniprot/P24228 P24228]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P38422 P38422]
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{{#set: left end position=16837}}
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** [http://www.uniprot.org/uniprot/Q9JUX6 Q9JUX6]
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{{#set: centisome position=54.11912    }}
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** [http://www.uniprot.org/uniprot/P08506 P08506]
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{{#set: reaction associated=MALTODEXGLUCOSID-RXN|RXN-14281|RXN-14282|RXN-14283|RXN-15910|RXN0-5183}}
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** [http://www.uniprot.org/uniprot/Q9Z7N2 Q9Z7N2]
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{{#set: pathway associated=PWY-842|GLYCOCAT-PWY}}
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** [http://www.uniprot.org/uniprot/P44466 P44466]
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** [http://www.uniprot.org/uniprot/Q53613 Q53613]
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** [http://www.uniprot.org/uniprot/Q05523 Q05523]
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** [http://www.uniprot.org/uniprot/P39042 P39042]
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** [http://www.uniprot.org/uniprot/Q59439 Q59439]
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** [http://www.uniprot.org/uniprot/P35150 P35150]
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** [http://www.uniprot.org/uniprot/P15555 P15555]
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** [http://www.uniprot.org/uniprot/P08750 P08750]
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** [http://www.uniprot.org/uniprot/P0AEB2 P0AEB2]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=beta-lactamase}}
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{{#set: ec number=EC-3.4.16.4}}
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{{#set: gene associated=Tiso_gene_18870}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:00, 21 March 2018

Gene Tiso_gene_599

  • right end position:
    • 18774
  • transcription direction:
    • POSITIVE
  • left end position:
    • 16837
  • centisome position:
    • 54.11912
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-611&oldid=38012"