Difference between revisions of "Tiso gene 15524"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] == * direction: ** LEFT-TO-RIGHT * common name: ** ascorbate_peroxidase * Synony...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9524 RXN-9524] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-octanoyl-[acyl-carrier...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9524 RXN-9524] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ascorbate_peroxidase
+
** 3-oxo-octanoyl-[acyl-carrier protein] reductase
 +
** polyketide_synthase
 +
** 3-oxoacyl-(acyl-carrier-protein)
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
−
** L-ascorbic acid peroxidase
 
−
** L-ascorbic acid-specific peroxidase
 
−
** ascorbic acid peroxidase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[PROTON]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[ASCORBATE]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[CPD-318]][c]
+
** 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[3-Hydroxy-octanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 H+[c] '''+''' 1 hydrogen peroxide[c] '''+''' 2 L-ascorbate[c] '''=>''' 2 H2O[c] '''+''' 2 monodehydroascorbate radical[c]
+
** 1 a 3-oxo-octanoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 a (3R)-3-hydroxyoctanoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5435]]
+
* Gene: [[Tiso_gene_13083]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_15962]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-synechocystis]]
−
* [[Tiso_gene_16028]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_500]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_136]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9885]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_624]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_10876]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10415]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_16579]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_135]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2261]], ascorbate glutathione cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2261 PWY-2261]
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30266 30266]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R09540 R09540]
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00644 R00644]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P48534 P48534]
 
−
** [http://www.uniprot.org/uniprot/Q7M287 Q7M287]
 
−
** [http://www.uniprot.org/uniprot/O49159 O49159]
 
−
** [http://www.uniprot.org/uniprot/Q7M3G0 Q7M3G0]
 
−
** [http://www.uniprot.org/uniprot/Q05431 Q05431]
 
−
** [http://www.uniprot.org/uniprot/Q43824 Q43824]
 
−
** [http://www.uniprot.org/uniprot/Q41772 Q41772]
 
−
** [http://www.uniprot.org/uniprot/Q41371 Q41371]
 
−
** [http://www.uniprot.org/uniprot/Q42661 Q42661]
 
−
** [http://www.uniprot.org/uniprot/Q42564 Q42564]
 
−
** [http://www.uniprot.org/uniprot/O46921 O46921]
 
−
** [http://www.uniprot.org/uniprot/P93404 P93404]
 
−
** [http://www.uniprot.org/uniprot/Q9FE01 Q9FE01]
 
−
** [http://www.uniprot.org/uniprot/O65634 O65634]
 
−
** [http://www.uniprot.org/uniprot/Q39843 Q39843]
 
−
** [http://www.uniprot.org/uniprot/O49122 O49122]
 
−
** [http://www.uniprot.org/uniprot/O49822 O49822]
 
−
** [http://www.uniprot.org/uniprot/Q42459 Q42459]
 
−
** [http://www.uniprot.org/uniprot/Q39780 Q39780]
 
−
** [http://www.uniprot.org/uniprot/Q96399 Q96399]
 
−
** [http://www.uniprot.org/uniprot/O81333 O81333]
 
−
** [http://www.uniprot.org/uniprot/O81603 O81603]
 
−
** [http://www.uniprot.org/uniprot/O81604 O81604]
 
−
** [http://www.uniprot.org/uniprot/Q42909 Q42909]
 
−
** [http://www.uniprot.org/uniprot/Q9STM9 Q9STM9]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ascorbate_peroxidase}}
+
{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] reductase}}
−
{{#set: common name=L-ascorbic acid peroxidase|L-ascorbic acid-specific peroxidase|ascorbic acid peroxidase}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: gene associated=Tiso_gene_5435|Tiso_gene_15962|Tiso_gene_16028}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
−
{{#set: in pathway=PWY-2261}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: ec number=EC-2.3.1.85}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: gene associated=Tiso_gene_13083|Tiso_gene_500|Tiso_gene_136|Tiso_gene_9885|Tiso_gene_624|Tiso_gene_10876|Tiso_gene_10415|Tiso_gene_16579|Tiso_gene_135|Tiso_gene_13394}}
 +
{{#set: in pathway=PWY-5971|PWY-5994}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:00, 21 March 2018

Reaction RXN-9524

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-octanoyl-[acyl-carrier protein] reductase
    • polyketide_synthase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-octanoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.






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