Difference between revisions of "RXN-17926"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16154 RXN-16154] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12243 RXN-12243] == * direction: ** LEFT-TO-RIGHT * common name: ** 15-cis-phytoene desaturase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16154 RXN-16154] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12243 RXN-12243] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** chloroplast_beta-keto_acyl_reductase
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** 15-cis-phytoene desaturase
* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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* Synonym(s):
 
* Synonym(s):
 +
** phytoene desaturase (ambiguous)
 +
** PDS
 +
** plant-type phytoene desaturase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-17401]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[CPD-17402]][c] '''+''' 1 [[NADP]][c]
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** 1 [[CPD-12321]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''=>''' 1 [[Plastoquinols]][c] '''+''' 1 [[CPD-13171]][c]
 
* With common name(s):
 
* With common name(s):
** 1 3-oxo-auricoloyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 (3R)-hydroxy-auricoloyl-CoA[c] '''+''' 1 NADP+[c]
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** 1 15-cis-phytoene[c] '''+''' 1 a plastoquinone[c] '''=>''' 1 a plastoquinol[c] '''+''' 1 15,9'-di-cis-phytofluene[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_9871]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6433]], hydroxylated fatty acid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6433 PWY-6433]
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* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
** '''4''' reactions found over '''22''' reactions in the full pathway
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[annotation]]
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* Category: [[manual]]
** Source: [[annotation-experimental_annotation]]
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** Source: [[manual-reactions_pwy-6475_tiso_add]]
*** Tool: [[pathwaytools]]
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*** Comment: [[reaction added to complete pwy-6475]]
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30194 30194]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R09653 R09653]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: common name=15-cis-phytoene desaturase}}
{{#set: ec number=EC-1.1.1.330}}
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{{#set: common name=phytoene desaturase (ambiguous)|PDS|plant-type phytoene desaturase}}
{{#set: gene associated=Tiso_gene_9871}}
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{{#set: in pathway=PWY-6475}}
{{#set: in pathway=PWY-6433}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=manual-reactions_pwy-6475_tiso_add}}
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction comment=reaction added to complete pwy-6475}}
{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:01, 21 March 2018

Reaction RXN-12243

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 15-cis-phytoene desaturase
  • Synonym(s):
    • phytoene desaturase (ambiguous)
    • PDS
    • plant-type phytoene desaturase

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links