Difference between revisions of "Tiso gene 6543"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9514 RXN-9514] == * direction: ** LEFT-TO-RIGHT * common name: ** acetoacetyl-[acyl-carrier pro...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCYLTRANSFERASE-RXN LEUCYLTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9514 RXN-9514] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCYLTRANSFERASE-RXN LEUCYLTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acetoacetyl-[acyl-carrier protein] reductase
+
** ORF
−
** polyketide_synthase
+
** leucyl_phenylalanyl-trna--protein
−
** 3-oxoacyl-(acyl-carrier-protein)
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** leucyl_phenylalanyl-trna--protein_transferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/2.3.2.6 EC-2.3.2.6]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Beta-3-hydroxybutyryl-ACPs]][c]
+
** 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[Protein-N-terminal-L-Lysine]][c] '''=>''' 1 [[L-leucyl-L-lysyl-Protein]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[LEU-tRNAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an acetoacetyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxybutanoyl-[acp][c]
+
** 1 an L-leucyl-[tRNAleu][c] '''+''' 1 an N-terminal L-lysyl-[protein][c] '''=>''' 1 a [protein] N-terminal L-leucyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 a tRNAleu[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13394]]
+
* Gene: [[Tiso_gene_13698]]
−
** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_16579]]
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* Gene: [[Tiso_gene_8540]]
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** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_136]]
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*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
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* Gene: [[Tiso_gene_2584]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_135]]
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*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13083]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9885]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10415]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_624]]
+
−
** [[pantograph]]-[[synechocystis]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[PWY-7801]], N-end rule pathway I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7801 PWY-7801]
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03813 R03813]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P73571 P73571]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acetoacetyl-[acyl-carrier protein] reductase}}
+
{{#set: common name=ORF}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=leucyl_phenylalanyl-trna--protein}}
−
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
+
{{#set: common name=leucyl_phenylalanyl-trna--protein_transferase}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: ec number=EC-2.3.2.6}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: gene associated=Tiso_gene_13698|Tiso_gene_8540|Tiso_gene_2584}}
−
{{#set: ec number=EC-1.1.1.100}}
+
{{#set: in pathway=PWY-7801}}
−
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_16579|Tiso_gene_136|Tiso_gene_135|Tiso_gene_500|Tiso_gene_13083|Tiso_gene_10876|Tiso_gene_9885|Tiso_gene_10415|Tiso_gene_624}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: in pathway=PWY-5971|PWY-5994|PWY-7388}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 17:02, 21 March 2018

Reaction LEUCYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • leucyl_phenylalanyl-trna--protein
    • leucyl_phenylalanyl-trna--protein_transferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7801, N-end rule pathway I (prokaryotic): PWY-7801
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






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