Difference between revisions of "RXN-14774"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_4094 == * left end position: ** 496 * transcription direction: ** NEGATIVE * right end position: ** 4921 * centisome position: ** 3.215976...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4142 RXNQT-4142] == * direction: ** LEFT-TO-RIGHT * common name: ** possible_l-galactose-1-ph...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4142 RXNQT-4142] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** possible_l-galactose-1-phosphate_phosphatase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/3.1.3.93 EC-3.1.3.93] |
| − | * | + | |
| − | ** 3. | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** | + | ** 1 [[CPDQT-4]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[L-Galactopyranose]][c] |
| − | *** | + | * With common name(s): |
| − | * [[ | + | ** 1 β-L-galactose 1-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 L-galactopyranose[c] |
| − | ** in-silico_annotation | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | == Pathways | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[PWY- | + | * Gene: [[Tiso_gene_11614]] |
| + | ** Source: [[orthology-athaliana]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_10754]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_15599]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | * [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882] | ||
| + | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26349 26349] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07674 R07674] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=possible_l-galactose-1-phosphate_phosphatase}} |
| + | {{#set: ec number=EC-3.1.3.93}} | ||
| + | {{#set: gene associated=Tiso_gene_11614|Tiso_gene_10754|Tiso_gene_15599}} | ||
| + | {{#set: in pathway=PWY-882}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 16:02, 21 March 2018
Contents
Reaction RXNQT-4142
- direction:
- LEFT-TO-RIGHT
- common name:
- possible_l-galactose-1-phosphate_phosphatase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPDQT-4[c] + 1 WATER[c] => 1 Pi[c] + 1 L-Galactopyranose[c]
- With common name(s):
- 1 β-L-galactose 1-phosphate[c] + 1 H2O[c] => 1 phosphate[c] + 1 L-galactopyranose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11614
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Gene: Tiso_gene_10754
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_15599
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-882, L-ascorbate biosynthesis I (L-galactose pathway): PWY-882
- 6 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
