Difference between revisions of "PWY-6133"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY] == * taxonomic range: ** [http...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14361 RXN-14361] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin_family_protein *...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14361 RXN-14361] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** protocatechuate degradation II (ortho-cleavage pathway)
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** exostosin_family_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.17 EC-2.4.1.17]
 
* Synonym(s):
 
* Synonym(s):
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** protocatechuate branch of the 3-oxoadipate pathway
 
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** protocatechuate branch of the 3-ketoadipate pathway
 
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** protocatechuate branch of the β-ketoadipate pathway
 
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** protocatechuate degradation via ortho-cleavage
 
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** protocatechuate degradation via the β-ketoadipate pathway
 
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** protocatechuate 3,4-cleavage
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[3-OXOADIPATE-ENOL-LACTONASE-RXN]]
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** 1 [[UDP-GLUCURONATE]][c] '''+''' 1 [[CPD0-934]][c] '''=>''' 1 [[CPD-15237]][c] '''+''' 1 [[UDP]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''3''' reaction(s) not found
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** 1 UDP-α-D-glucuronate[c] '''+''' 1 glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate[c] '''=>''' 1 glucosyl-(heptosyl)3-glucosyluronate-Kdo2-lipid A-phosphate[c] '''+''' 1 UDP[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-34-DIOXYGENASE-RXN PROTOCATECHUATE-34-DIOXYGENASE-RXN]
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** [http://metacyc.org/META/NEW-IMAGE?object=4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN 4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN]
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=5.5.1.2-RXN 5.5.1.2-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14141]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14140]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=protocatechuate degradation II (ortho-cleavage pathway)}}
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{{#set: common name=exostosin_family_protein}}
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{{#set: common name=protocatechuate branch of the 3-oxoadipate pathway|protocatechuate branch of the 3-ketoadipate pathway|protocatechuate branch of the β-ketoadipate pathway|protocatechuate degradation via ortho-cleavage|protocatechuate degradation via the β-ketoadipate pathway|protocatechuate 3,4-cleavage}}
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{{#set: ec number=EC-2.4.1.17}}
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{{#set: reaction found=1}}
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{{#set: gene associated=Tiso_gene_14141|Tiso_gene_14140}}
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{{#set: reaction not found=3}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:19, 10 January 2018

Reaction RXN-14361

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • exostosin_family_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-α-D-glucuronate[c] + 1 glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate[c] => 1 glucosyl-(heptosyl)3-glucosyluronate-Kdo2-lipid A-phosphate[c] + 1 UDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6133&oldid=12368"