Difference between revisions of "RXN-16097"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15068 RXN-15068] == * direction: ** LEFT-TO-RIGHT * common name: ** phospholipase A2 ** ORF **...")
(Created page with "Category:Gene == Gene Tiso_gene_5272 == * right end position: ** 5636 * transcription direction: ** POSITIVE * left end position: ** 2490 * centisome position: ** 18.18314...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15068 RXN-15068] ==
+
== Gene Tiso_gene_5272 ==
* direction:
+
* right end position:
** LEFT-TO-RIGHT
+
** 5636
* common name:
+
* transcription direction:
** phospholipase A2
+
** POSITIVE
** ORF
+
* left end position:
** abhydrolase_domain-containing_protein_4-like
+
** 2490
* ec number:
+
* centisome position:
** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
+
** 18.183146   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* Reaction: [[RXN-11109]]
** 1 [[CPD-8268]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[L-1-LYSOPHOSPHATIDATE]][c] '''+''' 1 [[OLEATE-CPD]][c]
+
* With common name(s):
+
** 1 dioleoyl phosphatidate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 1-oleyl-2-lyso-phosphatidate[c] '''+''' 1 oleate[c]
+
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[Tiso_gene_15047]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_12959]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_12960]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_15046]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
== Pathways  ==
+
* [[PWY-7417]], phospholipid remodeling (phosphatidate, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7417 PWY-7417]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=5636}}
{{#set: common name=phospholipase A2}}
+
{{#set: transcription direction=POSITIVE}}
{{#set: common name=ORF}}
+
{{#set: left end position=2490}}
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
+
{{#set: centisome position=18.183146    }}
{{#set: ec number=EC-3.1.1.4}}
+
{{#set: reaction associated=RXN-11109}}
{{#set: gene associated=Tiso_gene_15047|Tiso_gene_12959|Tiso_gene_12960|Tiso_gene_15046}}
+
{{#set: in pathway=PWY-7417}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 17:03, 21 March 2018

Gene Tiso_gene_5272

  • right end position:
    • 5636
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2490
  • centisome position:
    • 18.183146
  • Synonym(s):

Reactions associated

Pathways associated

External links