Difference between revisions of "HOMOGENTISATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11474 RXN-11474] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-glutaryl-[acp] methyl...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11474 RXN-11474] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
+
** 3-oxo-glutaryl-[acp] methyl ester synthase
−
** 3-hydroxyacyl-_dehydrogenase
+
** 3-oxoacyl-synthase
−
** hydroxyacyl-coenzyme_a_mitochondrial
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-11519]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-11520]][c]
+
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Malonyl-acp-methyl-ester]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-Ketoglutaryl-ACP-methyl-ester]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 OPC8-3-hydroxyacyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 OPC8-3-ketoacyl-CoA[c]
+
** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp] methyl ester[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-glutaryl-[acp] methyl ester[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5857]]
+
* Gene: [[Tiso_gene_15991]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_19302]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_14485]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_14027]]
+
* Gene: [[Tiso_gene_5939]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_18839]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18838]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14026]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
−
** '''15''' reactions found over '''19''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
{{#set: common name=3-oxo-glutaryl-[acp] methyl ester synthase}}
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
{{#set: common name=3-oxoacyl-synthase}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
{{#set: ec number=EC-2.3.1.41}}
−
{{#set: ec number=EC-1.1.1.35}}
+
{{#set: gene associated=Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_5939}}
−
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_14027|Tiso_gene_18839|Tiso_gene_14262|Tiso_gene_18838|Tiso_gene_14026}}
+
{{#set: in pathway=PWY-6519}}
−
{{#set: in pathway=PWY-735}}
+
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:03, 21 March 2018

Reaction RXN-11474

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-glutaryl-[acp] methyl ester synthase
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I: PWY-6519
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

"3-oxo-glutaryl-[acp] methyl ester synthase" cannot be used as a page name in this wiki.




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