Difference between revisions of "RXN-11474"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROKAEMPFEROL-4-REDUCTASE-RXN DIHYDROKAEMPFEROL-4-REDUCTASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Gene == Gene Tiso_gene_15900 == * right end position: ** 347 * transcription direction: ** POSITIVE * left end position: ** 147 * centisome position: ** 3.1163876...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROKAEMPFEROL-4-REDUCTASE-RXN DIHYDROKAEMPFEROL-4-REDUCTASE-RXN] ==
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== Gene Tiso_gene_15900 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 347
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* common name:
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* transcription direction:
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** dihydroflavonol-4-reductase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
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** 147
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* centisome position:
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** 3.1163876   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTOHEMEFERROCHELAT-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[DIHYDROKAEMPFEROL-CMPD]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[LEUCOPELARGONIDIN-CMPD]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NADPH[c] '''+''' 1 (+)-dihydrokaempferol[c] '''+''' 1 H+[c] '''=>''' 1 (2R,3S,4S)-leucopelargonidin[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15272]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9504]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9503]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11016]]
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** [[pantograph]]-[[athaliana]]
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== Pathways  ==
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* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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* Category: [[annotation]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY0-1415]]
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*** Tool: [[pathwaytools]]
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* [[HEMESYN2-PWY]]
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* [[HEME-BIOSYNTHESIS-II]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=347}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23019 23019]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=147}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03123 R03123]
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{{#set: centisome position=3.1163876    }}
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* UNIPROT:
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{{#set: reaction associated=PROTOHEMEFERROCHELAT-RXN}}
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** [http://www.uniprot.org/uniprot/P51102 P51102]
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{{#set: pathway associated=PWY0-1415|HEMESYN2-PWY|HEME-BIOSYNTHESIS-II}}
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** [http://www.uniprot.org/uniprot/P14720 P14720]
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** [http://www.uniprot.org/uniprot/P14721 P14721]
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** [http://www.uniprot.org/uniprot/P51106 P51106]
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** [http://www.uniprot.org/uniprot/P51105 P51105]
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** [http://www.uniprot.org/uniprot/P51107 P51107]
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** [http://www.uniprot.org/uniprot/P73212 P73212]
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** [http://www.uniprot.org/uniprot/O82105 O82105]
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** [http://www.uniprot.org/uniprot/Q9SAN4 Q9SAN4]
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** [http://www.uniprot.org/uniprot/P93776 P93776]
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** [http://www.uniprot.org/uniprot/P93777 P93777]
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** [http://www.uniprot.org/uniprot/P94105 P94105]
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** [http://www.uniprot.org/uniprot/O22589 O22589]
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** [http://www.uniprot.org/uniprot/O22605 O22605]
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** [http://www.uniprot.org/uniprot/P51104 P51104]
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** [http://www.uniprot.org/uniprot/Q9ZNV0 Q9ZNV0]
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** [http://www.uniprot.org/uniprot/Q9SAY2 Q9SAY2]
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** [http://www.uniprot.org/uniprot/P93840 P93840]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=dihydroflavonol-4-reductase}}
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{{#set: ec number=EC-1.1.1.219}}
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{{#set: gene associated=Tiso_gene_15272|Tiso_gene_9504|Tiso_gene_9503|Tiso_gene_11016}}
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{{#set: in pathway=PWY1F-823}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:04, 21 March 2018

Gene Tiso_gene_15900

  • right end position:
    • 347
  • transcription direction:
    • POSITIVE
  • left end position:
    • 147
  • centisome position:
    • 3.1163876
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11474&oldid=38478"