Difference between revisions of "CPD-14273"

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(Created page with "Category:Gene == Gene Tiso_gene_8669 == * left end position: ** 6109 * transcription direction: ** POSITIVE * right end position: ** 8938 * centisome position: ** 61.09610...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-GLU-AMINOTRANSFERASE-RXN ORNITHINE-GLU-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBL...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_8669 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-GLU-AMINOTRANSFERASE-RXN ORNITHINE-GLU-AMINOTRANSFERASE-RXN] ==
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* left end position:
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* direction:
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** 6109
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** Ornithine--oxo-glutarate aminotransferase
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* right end position:
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* ec number:
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** 8938
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** [http://enzyme.expasy.org/EC/2.6.1.13 EC-2.6.1.13]
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* centisome position:
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** 61.096107   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.2.1.21-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[L-ORNITHINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[GLT]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 L-ornithine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate-5-semialdehyde[c] '''+''' 1 L-glutamate[c]
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***ec-number
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* [[RXN-10769]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* Gene: [[Tiso_gene_11231]]
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** experimental_annotation
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** Source: [[orthology-synechocystis]]
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***ec-number
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== Pathways  ==
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* [[RXN-10773]]
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* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
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** in-silico_annotation
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** '''3''' reactions found over '''3''' reactions in the full pathway
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***ec-number
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* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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** experimental_annotation
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** '''6''' reactions found over '''7''' reactions in the full pathway
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***ec-number
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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* [[RXN-13602]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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** in-silico_annotation
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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***ec-number
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** experimental_annotation
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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***ec-number
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-13603]]
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** in-silico_annotation
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** '''4''' reactions found over '''6''' reactions in the full pathway
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***ec-number
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* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
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** experimental_annotation
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** '''3''' reactions found over '''4''' reactions in the full pathway
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***ec-number
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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* [[RXN-14179]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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** in-silico_annotation
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== Reconstruction information  ==
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***ec-number
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* Category: [[orthology]]
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** experimental_annotation
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** Source: [[orthology-synechocystis]]
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***ec-number
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*** Tool: [[pantograph]]
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* [[RXN-5341]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-8036]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-9674]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-3121]]
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* [[PWY-6002]]
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* [[PWY-6788]]
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* [[PWY-5176]]
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* [[PWY-7092]]
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* [[PWY-7091]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=6109}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25160 25160]
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{{#set: right end position=8938}}
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* LIGAND-RXN:
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{{#set: centisome position=61.096107    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00667 R00667]
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{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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{{#set: direction=REVERSIBLE}}
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
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{{#set: common name=Ornithine--oxo-glutarate aminotransferase}}
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{{#set: ec number=EC-2.6.1.13}}
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{{#set: gene associated=Tiso_gene_11231}}
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{{#set: in pathway=ARGASEDEG-PWY|PWY-6922|PWY-6344|PWY-3341|ARG-PRO-PWY|PWY-4981|ARGININE-SYN4-PWY|CITRULBIO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 16:04, 21 March 2018

Reaction ORNITHINE-GLU-AMINOTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Ornithine--oxo-glutarate aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ARGASEDEG-PWY, L-arginine degradation I (arginase pathway): ARGASEDEG-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III: PWY-3341
    • 5 reactions found over 5 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 4 reactions found over 6 reactions in the full pathway
  • ARGININE-SYN4-PWY, L-ornithine biosynthesis II: ARGININE-SYN4-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-14273&oldid=38497"