Difference between revisions of "Tiso gene 4560"

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(Created page with "Category:Gene == Gene Tiso_gene_6475 == * left end position: ** 550 * transcription direction: ** NEGATIVE * right end position: ** 2698 * centisome position: ** 4.5111547...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8350 RXN-8350] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_6475 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8350 RXN-8350] ==
* left end position:
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* direction:
** 550
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/1.14.19.30 EC-1.14.19.30]
* right end position:
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** 2698
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* centisome position:
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** 4.5111547   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[ACYLCOADEHYDROG-RXN]]
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* With identifiers:
** in-silico_annotation
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** 2 [[PROTON]][c] '''+''' 1 [[CPD-17281]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-17282]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c]
***automated-name-match
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* With common name(s):
** [[pantograph]]-[[esiliculosus]]
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** 2 H+[c] '''+''' 1 a [glycerolipid]-icosatetraenoate[c] '''+''' 1 oxygen[c] '''+''' 2 a ferrocytochrome b5[c] '''=>''' 2 H2O[c] '''+''' 1 a [glycerolipid]-icosapentaenoate[c] '''+''' 2 a ferricytochrome b5[c]
* [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
***ec-number
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== Pathways  ==
* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
** [[pantograph]]-[[esiliculosus]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
* [[RXN-11734]]
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* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
** in-silico_annotation
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** '''2''' reactions found over '''8''' reactions in the full pathway
***ec-number
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== Reconstruction information  ==
* [[RXN-13451]]
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* Category: [[annotation]]
** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
***ec-number
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*** Tool: [[pathwaytools]]
* [[RXN-13615]]
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** in-silico_annotation
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***ec-number
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* [[RXN-14131]]
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** in-silico_annotation
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***ec-number
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* [[RXN-14193]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14229]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14262]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14264]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14278]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-16540]]
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** in-silico_annotation
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***ec-number
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* [[RXN-16557]]
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** in-silico_annotation
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***ec-number
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* [[RXN-17775]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17779]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17783]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17784]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17788]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17792]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17796]]
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** in-silico_annotation
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***automated-name-match
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== Pathways associated ==
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[FAO-PWY]]
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* [[PWY-7656]]
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== External links  ==
 
== External links  ==
{{#set: left end position=550}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-1.14.19.30}}
{{#set: right end position=2698}}
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{{#set: in pathway=PWY-7602|PWY-6958}}
{{#set: centisome position=4.5111547    }}
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{{#set: reconstruction category=annotation}}
{{#set: reaction associated=ACYLCOADEHYDROG-RXN|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14193|RXN-14229|RXN-14262|RXN-14264|RXN-14278|RXN-16540|RXN-16557|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
{{#set: pathway associated=PWY-7094|PWY-7654|FAO-PWY|PWY-7656}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:04, 21 March 2018

Reaction RXN-8350

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): PWY-7602
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes): PWY-6958
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links