Difference between revisions of "Tiso gene 9421"

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(Created page with "Category:Gene == Gene Tiso_gene_17975 == * left end position: ** 105 * transcription direction: ** POSITIVE * right end position: ** 3329 * centisome position: ** 3.144654...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17975 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] ==
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* left end position:
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* direction:
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** 105
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/4.1.1.17 EC-4.1.1.17]
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* right end position:
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** 3329
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* centisome position:
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** 3.1446543   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-7741]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[L-ORNITHINE]][c] '''=>''' 1 [[PUTRESCINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 H+[c] '''+''' 1 L-ornithine[c] '''=>''' 1 putrescine[c] '''+''' 1 CO2[c]
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* [[PWY-5098]]
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* [[PWY-6927]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_10737]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[ORNDEG-PWY]], superpathway of ornithine degradation: [http://metacyc.org/META/NEW-IMAGE?object=ORNDEG-PWY ORNDEG-PWY]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-46]], putrescine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=105}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22964 22964]
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{{#set: right end position=3329}}
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* LIGAND-RXN:
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{{#set: centisome position=3.1446543    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
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{{#set: reaction associated=RXN-7741}}
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* UNIPROT:
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{{#set: pathway associated=PWY-5098|PWY-6927}}
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** [http://www.uniprot.org/uniprot/P24169 P24169]
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** [http://www.uniprot.org/uniprot/P27121 P27121]
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** [http://www.uniprot.org/uniprot/P27116 P27116]
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** [http://www.uniprot.org/uniprot/P27120 P27120]
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** [http://www.uniprot.org/uniprot/P43099 P43099]
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** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
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** [http://www.uniprot.org/uniprot/P08432 P08432]
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** [http://www.uniprot.org/uniprot/P27118 P27118]
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** [http://www.uniprot.org/uniprot/P11926 P11926]
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** [http://www.uniprot.org/uniprot/P14019 P14019]
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** [http://www.uniprot.org/uniprot/P00860 P00860]
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** [http://www.uniprot.org/uniprot/P09057 P09057]
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** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
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** [http://www.uniprot.org/uniprot/P44317 P44317]
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** [http://www.uniprot.org/uniprot/O66940 O66940]
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** [http://www.uniprot.org/uniprot/P27119 P27119]
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** [http://www.uniprot.org/uniprot/P49725 P49725]
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** [http://www.uniprot.org/uniprot/P50134 P50134]
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** [http://www.uniprot.org/uniprot/P93351 P93351]
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** [http://www.uniprot.org/uniprot/P93357 P93357]
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** [http://www.uniprot.org/uniprot/O15696 O15696]
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** [http://www.uniprot.org/uniprot/Q84527 Q84527]
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** [http://www.uniprot.org/uniprot/P41931 P41931]
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** [http://www.uniprot.org/uniprot/O69865 O69865]
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** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.1.1.17}}
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{{#set: gene associated=Tiso_gene_10737}}
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{{#set: in pathway=ORNDEG-PWY|PWY-6305|PWY-46}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 16:04, 21 March 2018

Reaction ORNDECARBOX-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ORNDEG-PWY, superpathway of ornithine degradation: ORNDEG-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6305, putrescine biosynthesis IV: PWY-6305
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-46, putrescine biosynthesis III: PWY-46
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9421&oldid=38571"