Difference between revisions of "RXN0-6479"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10604 RXN-10604] == * direction: ** LEFT-TO-RIGHT * common name: ** type_i_iodothyronine_deiodi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-KINASE-RXN SPHINGANINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10604 RXN-10604] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-KINASE-RXN SPHINGANINE-KINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** type_i_iodothyronine_deiodinase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.21.99.4 EC-1.21.99.4]
+
** [http://enzyme.expasy.org/EC/2.7.1.91 EC-2.7.1.91]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-10813]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-387]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[CPD-11395]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[CPD-13612]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-649]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3,3',5'-triiodo-L-thyronine[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 H+[c] '''+''' 1 iodide[c] '''+''' 1 an oxidized electron acceptor[c] '''+''' 1 3,3'-diiodothyronine[c]
+
** 1 ATP[c] '''+''' 1 D-erythro-sphinganine[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 sphinganine 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_20481]]
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* Gene: [[Tiso_gene_1163]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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* Gene: [[Tiso_gene_14560]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6260]], thyroid hormone metabolism I (via deiodination): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6260 PWY-6260]
+
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
−
** '''3''' reactions found over '''12''' reactions in the full pathway
+
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
 +
** '''5''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-creinhardtii]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15465 15465]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02976 R02976]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=type_i_iodothyronine_deiodinase}}
+
{{#set: ec number=EC-2.7.1.91}}
−
{{#set: ec number=EC-1.21.99.4}}
+
{{#set: gene associated=Tiso_gene_1163|Tiso_gene_14560}}
−
{{#set: gene associated=Tiso_gene_20481}}
+
{{#set: in pathway=PWY-5129|PWY-7119}}
−
{{#set: in pathway=PWY-6260}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 16:05, 21 March 2018

Reaction SPHINGANINE-KINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 D-erythro-sphinganine[c] => 1 ADP[c] + 1 H+[c] + 1 sphinganine 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5129, sphingolipid biosynthesis (plants): PWY-5129
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-7119, sphingolipid recycling and degradation (yeast): PWY-7119
    • 5 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




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