Difference between revisions of "BENZENE-NO2"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9536 RXN-9536] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-meristoyl-[acyl-carrier...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11476 RXN-11476] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-glutaryl-[acp] methyl...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9536 RXN-9536] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11476 RXN-11476] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-oxo-meristoyl-[acyl-carrier protein] reductase
+
** 3-oxo-glutaryl-[acp] methyl ester reductase
−
** polyketide_synthase
+
 
** 3-oxoacyl-(acyl-carrier-protein)
 
** 3-oxoacyl-(acyl-carrier-protein)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
 
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-oxo-myristoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxymyristoyl-ACPs]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-Ketoglutaryl-ACP-methyl-ester]][c] '''=>''' 1 [[3-Hydroxyglutaryl-ACP-methyl-ester]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxo-myristoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxymyristoyl-[acp][c]
+
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-glutaryl-[acp] methyl ester[c] '''=>''' 1 a (3R)-3-hydroxyglutaryl-[acp] methyl ester[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13394]]
+
* Gene: [[Tiso_gene_13083]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_10415]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_13083]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_9885]]
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
−
** EXPERIMENTAL_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_624]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_16579]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9885]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxo-meristoyl-[acyl-carrier protein] reductase}}
+
{{#set: common name=3-oxo-glutaryl-[acp] methyl ester reductase}}
−
{{#set: common name=polyketide_synthase}}
+
 
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
 
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
−
{{#set: ec number=EC-2.3.1.86}}
 
−
{{#set: ec number=EC-2.3.1.85}}
 
 
{{#set: ec number=EC-1.1.1.100}}
 
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_10415|Tiso_gene_13083|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_624|Tiso_gene_16579|Tiso_gene_136|Tiso_gene_9885|Tiso_gene_135}}
+
{{#set: gene associated=Tiso_gene_13083|Tiso_gene_9885}}
−
{{#set: in pathway=PWY-5971|PWY-5994}}
+
{{#set: in pathway=PWY-6519}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:06, 21 March 2018

Reaction RXN-11476

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-glutaryl-[acp] methyl ester reductase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I: PWY-6519
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

"3-oxo-glutaryl-[acp] methyl ester reductase" cannot be used as a page name in this wiki.




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