Difference between revisions of "Tiso gene 6635"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8350 RXN-8350] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNI-2 RXNI-2] == * direction: ** REVERSIBLE * common name: ** succinyl-_:3-ketoacid-coenzyme_a_tra...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8350 RXN-8350] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNI-2 RXNI-2] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** succinyl-_:3-ketoacid-coenzyme_a_transferase_mitochondrial
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.19.30 EC-1.14.19.30]
+
** [http://enzyme.expasy.org/EC/2.8.3.5 EC-2.8.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-17281]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-17282]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c]
+
** 1 [[3-KETOBUTYRATE]][c] '''+''' 1 [[SUC-COA]][c] '''<=>''' 1 [[SUC]][c] '''+''' 1 [[ACETOACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [glycerolipid]-icosatetraenoate[c] '''+''' 1 oxygen[c] '''+''' 2 H+[c] '''+''' 2 a ferrocytochrome b5[c] '''=>''' 2 H2O[c] '''+''' 1 a [glycerolipid]-icosapentaenoate[c] '''+''' 2 a ferricytochrome b5[c]
+
** 1 acetoacetate[c] '''+''' 1 succinyl-CoA[c] '''<=>''' 1 succinate[c] '''+''' 1 acetoacetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_6754]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
+
* [[REDCITCYC]], TCA cycle VIII (helicobacter): [http://metacyc.org/META/NEW-IMAGE?object=REDCITCYC REDCITCYC]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
+
* [[PWY66-368]], ketolysis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-368 PWY66-368]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: ec number=EC-1.14.19.30}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25480 25480]
−
{{#set: in pathway=PWY-7602|PWY-6958}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00410 R00410]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=succinyl-_:3-ketoacid-coenzyme_a_transferase_mitochondrial}}
 +
{{#set: ec number=EC-2.8.3.5}}
 +
{{#set: gene associated=Tiso_gene_6754}}
 +
{{#set: in pathway=REDCITCYC|PWY66-368}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:06, 21 March 2018

Reaction RXNI-2

  • direction:
    • REVERSIBLE
  • common name:
    • succinyl-_:3-ketoacid-coenzyme_a_transferase_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • REDCITCYC, TCA cycle VIII (helicobacter): REDCITCYC
    • 6 reactions found over 9 reactions in the full pathway
  • PWY66-368, ketolysis: PWY66-368
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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