Difference between revisions of "TRNA-adenine-37"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-884 RXN0-884] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http://e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14727 RXN-14727] == * direction: ** REVERSIBLE * common name: ** amidase * ec number: ** [http:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-884 RXN0-884] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14727 RXN-14727] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
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** REVERSIBLE
 
* common name:
 
* common name:
** ORF
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** amidase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4]
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** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''=>''' 1 [[CPD-4211]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
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** 1 [[WATER]][c] '''+''' 1 [[PROPIONAMIDE]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROPIONATE]][c]
 
* With common name(s):
 
* With common name(s):
** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''=>''' 1 dimethylallyl diphosphate[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2O[c]
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** 1 H2O[c] '''+''' 1 propionamide[c] '''<=>''' 1 ammonium[c] '''+''' 1 propanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_5609]]
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* Gene: [[Tiso_gene_13682]]
** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
***EC-NUMBER
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*** Assignment: AUTOMATED-NAME-MATCH
** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
 
== Pathways  ==
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: direction=REVERSIBLE}}
** [http://www.genome.jp/dbget-bin/www_bget?R08210 R08210]
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{{#set: common name=amidase}}
** [http://www.genome.jp/dbget-bin/www_bget?R07219 R07219]
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{{#set: ec number=EC-3.5.1.4}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: gene associated=Tiso_gene_13682}}
{{#set: common name=ORF}}
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{{#set: in pathway=}}
{{#set: ec number=EC-1.17.7.4}}
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{{#set: reconstruction category=annotation}}
{{#set: gene associated=Tiso_gene_5609}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:07, 21 March 2018

Reaction RXN-14727

  • direction:
    • REVERSIBLE
  • common name:
    • amidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links