Difference between revisions of "MG-PROTOPORPHYRIN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_16968 == * left end position: ** 9 * transcription direction: ** POSITIVE * right end position: ** 3667 * centisome position: ** 0.22488755...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-dependent_glutam...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_16968 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] ==
−
* left end position:
+
* direction:
−
** 9
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** ferredoxin-dependent_glutamate_synthase
−
* right end position:
+
−
** 3667
+
−
* centisome position:
+
−
** 0.22488755   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[FUMARATE-REDUCTASE-NADH-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c]
−
***ec-number
+
* With common name(s):
−
** experimental_annotation
+
** 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2O[c] '''+''' 1 L-glutamate[c] '''=>''' 1 2-oxoglutarate[c] '''+''' 1 ammonium[c] '''+''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c]
−
***ec-number
+
 
−
** [[pantograph]]-[[esiliculosus]]
+
== Genes associated with this reaction  ==
−
* [[R00357]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[pantograph]]-[[synechocystis]]
+
* Gene: [[Tiso_gene_1773]]
−
== Pathways associated ==
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_1154]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2581]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=9}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R10086 R10086]
−
{{#set: right end position=3667}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=0.22488755    }}
+
{{#set: common name=ferredoxin-dependent_glutamate_synthase}}
−
{{#set: reaction associated=FUMARATE-REDUCTASE-NADH-RXN|R00357}}
+
{{#set: gene associated=Tiso_gene_1773|Tiso_gene_1154|Tiso_gene_2581}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:08, 21 March 2018

Reaction RXN-12878

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin-dependent_glutamate_synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=MG-PROTOPORPHYRIN&oldid=38994"