Difference between revisions of "RXN-12510"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_5839 == * left end position: ** 3965 * transcription direction: ** POSITIVE * right end position: ** 4137 * centisome position: ** 30.79851...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYPOXANPRIBOSYLTRAN-RXN HYPOXANPRIBOSYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_5839 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYPOXANPRIBOSYLTRAN-RXN HYPOXANPRIBOSYLTRAN-RXN] ==
−
* left end position:
+
* direction:
−
** 3965
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** xanthine_phosphoribosyltransferase
−
* right end position:
+
* ec number:
−
** 4137
+
** [http://enzyme.expasy.org/EC/2.4.2.8 EC-2.4.2.8]
−
* centisome position:
+
−
** 30.79851   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ADENYL-KIN-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[PRPP]][c] '''+''' 1 [[HYPOXANTHINE]][c] '''=>''' 1 [[IMP]][c] '''+''' 1 [[PPI]][c]
−
***ec-number
+
* With common name(s):
−
** [[pantograph]]-[[creinhardtii]]
+
** 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 hypoxanthine[c] '''=>''' 1 IMP[c] '''+''' 1 diphosphate[c]
−
* [[ATAM]]
+
 
−
** [[pantograph]]-[[creinhardtii]]
+
== Genes associated with this reaction  ==
−
* [[ATAMm]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_13506]]
−
* [[ATDAM]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[DEOXYADENYLATE-KINASE-RXN]]
+
== Pathways  ==
−
** [[pantograph]]-[[creinhardtii]]
+
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
−
** [[pantograph]]-[[creinhardtii]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
== Pathways associated ==
+
* [[PWY-6610]], adenine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6610 PWY-6610]
−
* [[PWY-7219]]
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7224]]
+
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=3965}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17973 17973]
−
{{#set: right end position=4137}}
+
* LIGAND-RXN:
−
{{#set: centisome position=30.79851    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01132 R01132]
−
{{#set: reaction associated=ADENYL-KIN-RXN|ATAM|ATAMm|ATDAM|DEOXYADENYLATE-KINASE-RXN}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-7219|PWY-7224}}
+
** [http://www.uniprot.org/uniprot/Q9JWG0 Q9JWG0]
 +
** [http://www.uniprot.org/uniprot/P45078 P45078]
 +
** [http://www.uniprot.org/uniprot/Q59049 Q59049]
 +
** [http://www.uniprot.org/uniprot/O27375 O27375]
 +
** [http://www.uniprot.org/uniprot/Q64531 Q64531]
 +
** [http://www.uniprot.org/uniprot/Q8IJS1 Q8IJS1]
 +
** [http://www.uniprot.org/uniprot/P00492 P00492]
 +
** [http://www.uniprot.org/uniprot/P00494 P00494]
 +
** [http://www.uniprot.org/uniprot/P00493 P00493]
 +
** [http://www.uniprot.org/uniprot/P09383 P09383]
 +
** [http://www.uniprot.org/uniprot/P07833 P07833]
 +
** [http://www.uniprot.org/uniprot/P20035 P20035]
 +
** [http://www.uniprot.org/uniprot/P18134 P18134]
 +
** [http://www.uniprot.org/uniprot/P27605 P27605]
 +
** [http://www.uniprot.org/uniprot/P37171 P37171]
 +
** [http://www.uniprot.org/uniprot/Q64401 Q64401]
 +
** [http://www.uniprot.org/uniprot/Q02522 Q02522]
 +
** [http://www.uniprot.org/uniprot/Q07010 Q07010]
 +
** [http://www.uniprot.org/uniprot/Q8X945 Q8X945]
 +
** [http://www.uniprot.org/uniprot/P42085 P42085]
 +
** [http://www.uniprot.org/uniprot/P37472 P37472]
 +
** [http://www.uniprot.org/uniprot/Q9ZNK6 Q9ZNK6]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=xanthine_phosphoribosyltransferase}}
 +
{{#set: ec number=EC-2.4.2.8}}
 +
{{#set: gene associated=Tiso_gene_13506}}
 +
{{#set: in pathway=PWY-6609|PWY-6610}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:08, 21 March 2018

Reaction HYPOXANPRIBOSYLTRAN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xanthine_phosphoribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-phospho-α-D-ribose 1-diphosphate[c] + 1 hypoxanthine[c] => 1 IMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6609, adenine and adenosine salvage III: PWY-6609
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6610, adenine salvage: PWY-6610
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12510&oldid=39010"