Difference between revisions of "ENTBACSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9520 RXN-9520] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec numb...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ENTBACSYN-PWY ENTBACSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9520 RXN-9520] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ENTBACSYN-PWY ENTBACSYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
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** polyketide_synthase
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** enterobactin biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''10''' reactions in the full pathway
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** 1 [[R-3-hydroxyhexanoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Hex-2-enoyl-ACPs]][c]
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* [[ENTDB-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a (3R)-3-hydroxyhexanoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans hex-2-enoyl-[acp][c]
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*** [[Tiso_gene_14278]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5901]]
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* Gene: [[Tiso_gene_135]]
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** 0 associated gene:
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-15889]]
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*** Assignment: EC-NUMBER
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** 1 associated gene(s):
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* Gene: [[Tiso_gene_10876]]
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*** [[Tiso_gene_14278]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_13394]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=DHBAMPLIG-RXN DHBAMPLIG-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=ENTF-RXN ENTF-RXN]
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* Gene: [[Tiso_gene_6884]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ENTG-RXN ENTG-RXN]
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** Source: [[annotation-experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15890 RXN-15890]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15891 RXN-15891]
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* Gene: [[Tiso_gene_500]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6442 RXN0-6442]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: common name=polyketide_synthase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=ENTBACSYN-PWY ENTBACSYN-PWY]
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: common name=enterobactin biosynthesis}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: reaction found=3}}
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{{#set: gene associated=Tiso_gene_135|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_6884|Tiso_gene_500|Tiso_gene_136}}
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{{#set: total reaction=10}}
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{{#set: in pathway=PWY-5971|PWY-5994}}
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{{#set: completion rate=30.0}}
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{{#set: reconstruction category=manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:05, 21 March 2018

Pathway ENTBACSYN-PWY

  • taxonomic range:
  • common name:
    • enterobactin biosynthesis
  • Synonym(s):

Reaction(s) found

3 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ENTBACSYN-PWY&oldid=39442"