Difference between revisions of "Tiso gene 8353"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.117-RXN 2.4.1.117-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** udp-glucose--undeca...")
(Created page with "Category:Gene == Gene Tiso_gene_8353 == * right end position: ** 6959 * transcription direction: ** NEGATIVE * left end position: ** 4577 * centisome position: ** 44.35937...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.117-RXN 2.4.1.117-RXN] ==
+
== Gene Tiso_gene_8353 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 6959
−
* common name:
+
* transcription direction:
−
** udp-glucose--undecaprenyl-phosphate_glucosyltransferase
+
** NEGATIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/2.4.1.117 EC-2.4.1.117]
+
** 4577
 +
* centisome position:
 +
** 44.35937   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[LYSOPHOSPHOLIPASE-RXN]]
−
** 1 [[DOLICHOLP]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[CPD-166]][c]
+
** Source: [[annotation-experimental_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 a dolichyl phosphate[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 UDP[c] '''+''' 1 a dolichyl β-D-glucosyl phosphate[c]
+
* Reaction: [[RXN-15035]]
−
 
+
** Source: [[annotation-experimental_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* Gene: [[Tiso_gene_8160]]
+
* [[PWY-7409]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
== Pathways  ==
+
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=6959}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15401 15401]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=4577}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01005 R01005]
+
{{#set: centisome position=44.35937    }}
−
* UNIPROT:
+
{{#set: reaction associated=LYSOPHOSPHOLIPASE-RXN|RXN-15035}}
−
** [http://www.uniprot.org/uniprot/P40350 P40350]
+
{{#set: pathway associated=PWY-7409}}
−
** [http://www.uniprot.org/uniprot/Q9UUT0 Q9UUT0]
+
−
** [http://www.uniprot.org/uniprot/Q9Y673 Q9Y673]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=udp-glucose--undecaprenyl-phosphate_glucosyltransferase}}
+
−
{{#set: ec number=EC-2.4.1.117}}
+
−
{{#set: gene associated=Tiso_gene_8160}}
+
−
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:06, 21 March 2018

Gene Tiso_gene_8353

  • right end position:
    • 6959
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4577
  • centisome position:
    • 44.35937
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8353&oldid=39541"