Difference between revisions of "PWY-7141"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13374 RXN-13374] == * direction: ** LEFT-TO-RIGHT * common name: ** 9-cis-epoxycarotenoid_dioxy...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7141 PWY-7141] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13374 RXN-13374] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7141 PWY-7141] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
** 9-cis-epoxycarotenoid_dioxygenase
+
** (3S)-linalool biosynthesis
** 9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein
+
** beta-carotene
+
* ec number:
+
** [http://enzyme.expasy.org/EC/1.13.11.63 EC-1.13.11.63]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** (S)-linalool biosynthesis
 +
** S-(+)-linalool biosynthesis
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''1''' reactions found over '''2''' reactions in the full pathway
** 1 [[CPD1F-129]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[RETINAL]][c]
+
* [[GPPSYN-RXN]]
* With common name(s):
+
** 9 associated gene(s):
** 1 all-trans-β-carotene[c] '''+''' 1 oxygen[c] '''=>''' 2 all-trans-retinal[c]
+
*** [[Tiso_gene_19542]]
 
+
*** [[Tiso_gene_18201]]
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_16284]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_2848]]
* Gene: [[Tiso_gene_13078]]
+
*** [[Tiso_gene_1035]]
** Source: [[annotation-in-silico_annotation]]
+
*** [[Tiso_gene_4719]]
*** Assignment: EC-NUMBER
+
*** [[Tiso_gene_11582]]
* Gene: [[Tiso_gene_4653]]
+
*** [[Tiso_gene_13582]]
** Source: [[annotation-in-silico_annotation]]
+
*** [[Tiso_gene_10317]]
*** Assignment: EC-NUMBER
+
** 5 reconstruction source(s) associated:
* Gene: [[Tiso_gene_7740]]
+
*** [[orthology-athaliana]]
** Source: [[annotation-in-silico_annotation]]
+
*** [[orthology-creinhardtii]]
*** Assignment: EC-NUMBER
+
*** [[orthology-synechocystis]]
* Gene: [[Tiso_gene_13079]]
+
*** [[orthology-esiliculosus]]
** Source: [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
*** Assignment: EC-NUMBER
+
== Reaction(s) not found ==
== Pathways  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=4.2.3.25-RXN 4.2.3.25-RXN]
* [[PWY-6857]], retinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[annotation]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: taxonomic range=TAX-2759}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32888 32888]
+
{{#set: common name=(3S)-linalool biosynthesis}}
* LIGAND-RXN:
+
{{#set: common name=(S)-linalool biosynthesis|S-(+)-linalool biosynthesis}}
** [http://www.genome.jp/dbget-bin/www_bget?R00032 R00032]
+
{{#set: reaction found=1}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: total reaction=2}}
{{#set: common name=9-cis-epoxycarotenoid_dioxygenase}}
+
{{#set: completion rate=50.0}}
{{#set: common name=9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein}}
+
{{#set: common name=beta-carotene}}
+
{{#set: ec number=EC-1.13.11.63}}
+
{{#set: gene associated=Tiso_gene_13078|Tiso_gene_4653|Tiso_gene_7740|Tiso_gene_13079}}
+
{{#set: in pathway=PWY-6857}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:07, 21 March 2018

Pathway PWY-7141

  • taxonomic range:
  • common name:
    • (3S)-linalool biosynthesis
  • Synonym(s):
    • (S)-linalool biosynthesis
    • S-(+)-linalool biosynthesis

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links