|
|
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12195 RXN-12195] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381] == |
| − | * direction: | + | * taxonomic range: |
| − | ** LEFT-TO-RIGHT | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] |
| | * common name: | | * common name: |
| − | ** helicase_mov-10-_-like | + | ** fatty acid biosynthesis initiation I |
| − | ** hsp104
| + | |
| − | ** ORF
| + | |
| − | ** 26s_proteaseregulatorysubunit6bhomolog
| + | |
| − | ** nfx1-type_zinc_finger-containing_protein_1
| + | |
| − | ** atp-dependent_metalloprotease
| + | |
| − | ** adenylate_kinase_domain-containing_protein_1
| + | |
| − | ** replication_factor_c_subunit_2
| + | |
| − | ** member_of_the_hsp104_clp_superfamily
| + | |
| − | ** replication_factor_c_subunit_5
| + | |
| − | ** at1g33290
| + | |
| − | ** replication_factor_c_subunit_3
| + | |
| − | ** sh2_domain_containing_protein
| + | |
| − | ** replication_control_protein_1_like
| + | |
| − | ** aaa_family_cdc48_subfamily
| + | |
| − | ** adenylate_guanylate
| + | |
| − | ** replication_factor_c_subunit_1
| + | |
| − | ** dna-binding_protein_smubp-2
| + | |
| − | ** e3_ubiquitin-protein_ligase_rnf213-like
| + | |
| − | ** atp-dependent_zinc_metalloprotease
| + | |
| − | ** cytosolic_fe-s_cluster_assembly_factor_nubp1_homolog
| + | |
| − | ** uncharacterized_transmembrane_protein_ddb_g0290641
| + | |
| − | ** isoform_m_of_dna_helicase_mcm9
| + | |
| − | ** atpase_family_aaa_domain-containing_protein_2b-_partial
| + | |
| − | ** trna-splicing_endonuclease_positive_effector
| + | |
| − | ** gtpase_der
| + | |
| − | ** uridine_kinase
| + | |
| − | ** fidgetin-like_protein1
| + | |
| − | ** origin_recognition_complex_subunit_4
| + | |
| − | ** atpase_aaa
| + | |
| − | ** atpase_afg2_protein
| + | |
| − | ** atpase_family_associated_with_various_cellular_activities
| + | |
| − | ** katanin_p60_atpase-containing_subunit_a-like_2
| + | |
| − | ** atp-dependent_proteaseatpasesubunit
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/3.6.1.15 EC-3.6.1.15]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** de novo fatty acid biosynthesis, initial reactions |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) found == |
| − | * With identifiers:
| + | '''3''' reactions found over '''3''' reactions in the full pathway |
| − | ** 1 [[CTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CDP]][c]
| + | * [[2.3.1.180-RXN]] |
| − | * With common name(s): | + | ** 1 associated gene(s): |
| − | ** 1 CTP[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 CDP[c]
| + | *** [[Tiso_gene_15991]] |
| − | | + | ** 2 reconstruction source(s) associated: |
| − | == Genes associated with this reaction ==
| + | *** [[annotation-in-silico_annotation]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | *** [[annotation-experimental_annotation]] |
| − | * Gene: [[Tiso_gene_1960]]
| + | * [[ACETYL-COA-CARBOXYLTRANSFER-RXN]] |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | ** 4 associated gene(s): |
| − | *** Assignment: EC-NUMBER | + | *** [[Tiso_gene_2812]] |
| − | * Gene: [[Tiso_gene_11098]] | + | *** [[Tiso_gene_3800]] |
| − | ** Source: [[annotation-in-silico_annotation]] | + | *** [[Tiso_gene_5029]] |
| − | *** Assignment: EC-NUMBER | + | *** [[Tiso_gene_7965]] |
| − | * Gene: [[Tiso_gene_12899]] | + | ** 5 reconstruction source(s) associated: |
| − | ** Source: [[annotation-in-silico_annotation]] | + | *** [[annotation-experimental_annotation]] |
| − | *** Assignment: EC-NUMBER | + | *** [[orthology-athaliana]] |
| − | ** Source: [[annotation-experimental_annotation]]
| + | *** [[annotation-in-silico_annotation]] |
| − | *** Assignment: EC-NUMBER | + | *** [[manual-primary_network]] |
| − | * Gene: [[Tiso_gene_2924]]
| + | *** [[orthology-esiliculosus]] |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | * [[MALONYL-COA-ACP-TRANSACYL-RXN]] |
| − | *** Assignment: EC-NUMBER
| + | ** 7 associated gene(s): |
| − | * Gene: [[Tiso_gene_14226]]
| + | *** [[Tiso_gene_10876]] |
| − | ** Source: [[annotation-in-silico_annotation]] | + | *** [[Tiso_gene_136]] |
| − | *** Assignment: EC-NUMBER | + | *** [[Tiso_gene_19309]] |
| − | * Gene: [[Tiso_gene_674]]
| + | *** [[Tiso_gene_135]] |
| − | ** Source: [[annotation-in-silico_annotation]] | + | *** [[Tiso_gene_18460]] |
| − | *** Assignment: EC-NUMBER | + | *** [[Tiso_gene_500]] |
| − | * Gene: [[Tiso_gene_8601]]
| + | *** [[Tiso_gene_13394]] |
| − | ** Source: [[annotation-in-silico_annotation]] | + | ** 5 reconstruction source(s) associated: |
| − | *** Assignment: EC-NUMBER | + | *** [[annotation-experimental_annotation]] |
| − | * Gene: [[Tiso_gene_8584]]
| + | *** [[manual-primary_network]] |
| − | ** Source: [[annotation-in-silico_annotation]] | + | *** [[annotation-in-silico_annotation]] |
| − | *** Assignment: EC-NUMBER | + | *** [[orthology-synechocystis]] |
| − | * Gene: [[Tiso_gene_9959]]
| + | *** [[orthology-esiliculosus]] |
| − | ** Source: [[annotation-in-silico_annotation]] | + | == Reaction(s) not found == |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_2929]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_9423]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_873]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_8763]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_9004]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_14816]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_5529]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_4192]] | + | |
| − | ** Source: [[orthology-esiliculosus]] | + | |
| − | * Gene: [[Tiso_gene_8859]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_14227]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_9234]] | + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_38]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_2889]] | + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_4194]]
| + | |
| − | ** Source: [[orthology-esiliculosus]] | + | |
| − | * Gene: [[Tiso_gene_15043]] | + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_537]]
| + | |
| − | ** Source: [[orthology-esiliculosus]] | + | |
| − | * Gene: [[Tiso_gene_4026]] | + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_14646]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_195]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_3653]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_1444]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_8949]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_17616]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Tiso_gene_546]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_13738]] | + | |
| − | ** Source: [[orthology-esiliculosus]] | + | |
| − | * Gene: [[Tiso_gene_538]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_2449]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_1959]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_7387]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_2447]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_20353]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_5166]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_4596]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_2448]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_5525]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_12148]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_20327]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_11012]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_2176]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_13325]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_13268]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_12149]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_2451]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_6614]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_2897]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_4436]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_623]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_9926]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_6181]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_16478]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_6180]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_1984]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_2452]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_15465]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_4092]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_7745]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_829]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_250]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_1541]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_199]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_7123]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_10282]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_9114]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_2450]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_14474]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_8461]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_4437]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_4726]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_9659]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_8950]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_2068]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_9243]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_13264]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_4330]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_13681]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_1610]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_13653]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: AUTOMATED-NAME-MATCH
| + | |
| − | * Gene: [[Tiso_gene_17449]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_10221]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_19098]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_4155]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_8164]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_19350]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_2631]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_17751]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_1611]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_3287]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_7734]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_572]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Gene: [[Tiso_gene_1291]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_14239]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_8860]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
| + | |
| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
| + | |
| − | ** '''6''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
| + | |
| − | ** '''8''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
| + | |
| − | ** '''8''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN: | + | * ECOCYC: |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00569 R00569] | + | ** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-4381 PWY-4381] |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | * ARACYC: |
| − | {{#set: common name=helicase_mov-10-_-like}}
| + | ** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-4381 PWY-4381] |
| − | {{#set: common name=hsp104}}
| + | {{#set: taxonomic range=TAX-2759}} |
| − | {{#set: common name=ORF}}
| + | {{#set: taxonomic range=TAX-2}} |
| − | {{#set: common name=26s_proteaseregulatorysubunit6bhomolog}}
| + | {{#set: common name=fatty acid biosynthesis initiation I}} |
| − | {{#set: common name=nfx1-type_zinc_finger-containing_protein_1}}
| + | {{#set: common name=de novo fatty acid biosynthesis, initial reactions}} |
| − | {{#set: common name=atp-dependent_metalloprotease}} | + | {{#set: reaction found=3}} |
| − | {{#set: common name=adenylate_kinase_domain-containing_protein_1}} | + | {{#set: total reaction=3}} |
| − | {{#set: common name=replication_factor_c_subunit_2}}
| + | {{#set: completion rate=100.0}} |
| − | {{#set: common name=member_of_the_hsp104_clp_superfamily}}
| + | |
| − | {{#set: common name=replication_factor_c_subunit_5}}
| + | |
| − | {{#set: common name=at1g33290}}
| + | |
| − | {{#set: common name=replication_factor_c_subunit_3}}
| + | |
| − | {{#set: common name=sh2_domain_containing_protein}}
| + | |
| − | {{#set: common name=replication_control_protein_1_like}}
| + | |
| − | {{#set: common name=aaa_family_cdc48_subfamily}}
| + | |
| − | {{#set: common name=adenylate_guanylate}}
| + | |
| − | {{#set: common name=replication_factor_c_subunit_1}}
| + | |
| − | {{#set: common name=dna-binding_protein_smubp-2}}
| + | |
| − | {{#set: common name=e3_ubiquitin-protein_ligase_rnf213-like}} | + | |
| − | {{#set: common name=atp-dependent_zinc_metalloprotease}} | + | |
| − | {{#set: common name=cytosolic_fe-s_cluster_assembly_factor_nubp1_homolog}} | + | |
| − | {{#set: common name=uncharacterized_transmembrane_protein_ddb_g0290641}} | + | |
| − | {{#set: common name=isoform_m_of_dna_helicase_mcm9}} | + | |
| − | {{#set: common name=atpase_family_aaa_domain-containing_protein_2b-_partial}}
| + | |
| − | {{#set: common name=trna-splicing_endonuclease_positive_effector}}
| + | |
| − | {{#set: common name=gtpase_der}}
| + | |
| − | {{#set: common name=uridine_kinase}}
| + | |
| − | {{#set: common name=fidgetin-like_protein1}}
| + | |
| − | {{#set: common name=origin_recognition_complex_subunit_4}}
| + | |
| − | {{#set: common name=atpase_aaa}}
| + | |
| − | {{#set: common name=atpase_afg2_protein}}
| + | |
| − | {{#set: common name=atpase_family_associated_with_various_cellular_activities}}
| + | |
| − | {{#set: common name=katanin_p60_atpase-containing_subunit_a-like_2}}
| + | |
| − | {{#set: common name=atp-dependent_proteaseatpasesubunit}}
| + | |
| − | {{#set: ec number=EC-3.6.1.15}}
| + | |
| − | {{#set: gene associated=Tiso_gene_1960|Tiso_gene_11098|Tiso_gene_12899|Tiso_gene_2924|Tiso_gene_14226|Tiso_gene_674|Tiso_gene_8601|Tiso_gene_8584|Tiso_gene_9959|Tiso_gene_2929|Tiso_gene_9423|Tiso_gene_873|Tiso_gene_8763|Tiso_gene_9004|Tiso_gene_14816|Tiso_gene_5529|Tiso_gene_4192|Tiso_gene_8859|Tiso_gene_14227|Tiso_gene_9234|Tiso_gene_38|Tiso_gene_2889|Tiso_gene_4194|Tiso_gene_15043|Tiso_gene_537|Tiso_gene_4026|Tiso_gene_14646|Tiso_gene_195|Tiso_gene_3653|Tiso_gene_1444|Tiso_gene_8949|Tiso_gene_17616|Tiso_gene_546|Tiso_gene_13738|Tiso_gene_538|Tiso_gene_2449|Tiso_gene_1959|Tiso_gene_7387|Tiso_gene_2447|Tiso_gene_20353|Tiso_gene_5166|Tiso_gene_4596|Tiso_gene_2448|Tiso_gene_5525|Tiso_gene_12148|Tiso_gene_20327|Tiso_gene_11012|Tiso_gene_2176|Tiso_gene_13325|Tiso_gene_13268|Tiso_gene_12149|Tiso_gene_2451|Tiso_gene_6614|Tiso_gene_2897|Tiso_gene_4436|Tiso_gene_623|Tiso_gene_9926|Tiso_gene_6181|Tiso_gene_16478|Tiso_gene_6180|Tiso_gene_1984|Tiso_gene_2452|Tiso_gene_15465|Tiso_gene_4092|Tiso_gene_7745|Tiso_gene_829|Tiso_gene_250|Tiso_gene_1541|Tiso_gene_199|Tiso_gene_7123|Tiso_gene_10282|Tiso_gene_9114|Tiso_gene_2450|Tiso_gene_14474|Tiso_gene_8461|Tiso_gene_4437|Tiso_gene_4726|Tiso_gene_9659|Tiso_gene_8950|Tiso_gene_2068|Tiso_gene_9243|Tiso_gene_13264|Tiso_gene_4330|Tiso_gene_13681|Tiso_gene_1610|Tiso_gene_13653|Tiso_gene_17449|Tiso_gene_10221|Tiso_gene_19098|Tiso_gene_4155|Tiso_gene_8164|Tiso_gene_19350|Tiso_gene_2631|Tiso_gene_17751|Tiso_gene_1611|Tiso_gene_3287|Tiso_gene_7734|Tiso_gene_572|Tiso_gene_1291|Tiso_gene_14239|Tiso_gene_8860}}
| + | |
| − | {{#set: in pathway=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
