Difference between revisions of "Tiso gene 16872"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4241 RXN-4241] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Tiso_gene_16872 == * right end position: ** 3524 * transcription direction: ** POSITIVE * left end position: ** 185 * centisome position: ** 4.540992...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4241 RXN-4241] ==
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== Gene Tiso_gene_16872 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3524
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.13 EC-1.14.13]
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** POSITIVE
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* left end position:
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** 185
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* centisome position:
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** 4.540992   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.1.232-RXN]]
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** 1 [[CPD-720]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-17420]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 6-deoxotyphasterol[c] '''+''' 1 H+[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 H2O[c] '''+''' 1 6-hydroxytyphasterol[c]
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* Reaction: [[RXN-5462]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Tiso_gene_8263]]
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_3577]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-699]], brassinosteroid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699]
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** '''11''' reactions found over '''25''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=3524}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07458 R07458]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=185}}
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{{#set: ec number=EC-1.14.13}}
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{{#set: centisome position=4.540992    }}
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{{#set: gene associated=Tiso_gene_8263|Tiso_gene_3577}}
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{{#set: reaction associated=2.4.1.232-RXN|RXN-5462}}
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{{#set: in pathway=PWY-699}}
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{{#set: pathway associated=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:08, 21 March 2018

Gene Tiso_gene_16872

  • right end position:
    • 3524
  • transcription direction:
    • POSITIVE
  • left end position:
    • 185
  • centisome position:
    • 4.540992
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16872&oldid=39711"