Difference between revisions of "PWY-4202"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN] == * direction: ** REV...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9542 RXN-9542] == * direction: ** LEFT-TO-RIGHT * common name: ** trans hexadecenoyl-[acp] redu...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9542 RXN-9542] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acyl-coenzyme_a_oxidase
+
** trans hexadecenoyl-[acp] reductase (NADPH, B-specific)
−
** acyl-_dehydrogenase
+
** polyketide_synthase
−
** ORF
+
−
** acyl-CoA_dehydrogenase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8.8 EC-1.3.8.8]
+
** [http://enzyme.expasy.org/EC/1.3.1.10 EC-1.3.1.10]
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/1.3.1.39 EC-1.3.1.39]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[Long-Chain-234-Saturated-acyl-CoAs]][c] '''+''' 1 [[ETF-Oxidized]][c] '''<=>''' 1 [[Long-Chain-Trans-23-Dehydroacyl-CoA]][c] '''+''' 1 [[ETF-Reduced]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[2-Hexadecenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Palmitoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a long-chain 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''<=>''' 1 a long-chain trans-2,3-dehydroacyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
** 1 H+[c] '''+''' 1 a trans hexadecenoyl-[acp][c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 a palmitoyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_883]]
+
* [[Tiso_gene_10778]]
−
** EXPERIMENTAL_ANNOTATION
+
** [[pantograph]]-[[synechocystis]]
−
***EC-NUMBER
+
* [[Tiso_gene_136]]
−
* [[Tiso_gene_16631]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_5991]]
+
* [[Tiso_gene_500]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_18566]]
+
* [[Tiso_gene_10876]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_6475]]
+
* [[Tiso_gene_13394]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_17967]]
+
* [[Tiso_gene_135]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[synechocystis]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00392 R00392]
+
{{#set: common name=trans hexadecenoyl-[acp] reductase (NADPH, B-specific)}}
−
* UNIPROT:
+
{{#set: common name=polyketide_synthase}}
−
** [http://www.uniprot.org/uniprot/P15650 P15650]
+
{{#set: ec number=EC-1.3.1.10}}
−
** [http://www.uniprot.org/uniprot/Q8IUN8 Q8IUN8]
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: ec number=EC-1.3.1.39}}
−
{{#set: common name=acyl-coenzyme_a_oxidase}}
+
{{#set: ec number=EC-2.3.1.85}}
−
{{#set: common name=acyl-_dehydrogenase}}
+
{{#set: gene associated=Tiso_gene_10778|Tiso_gene_136|Tiso_gene_500|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_135}}
−
{{#set: common name=ORF}}
+
{{#set: in pathway=PWY-5994}}
−
{{#set: common name=acyl-CoA_dehydrogenase}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: ec number=EC-1.3.8.8}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: gene associated=Tiso_gene_883|Tiso_gene_16631|Tiso_gene_5991|Tiso_gene_18566|Tiso_gene_6475|Tiso_gene_17967}}
+
{{#set: reconstruction source=synechocystis}}
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:21, 10 January 2018

Reaction RXN-9542

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"trans hexadecenoyl-[acp] reductase (NADPH, B-specific)" cannot be used as a page name in this wiki.







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-4202&oldid=12511"