Difference between revisions of "RXN-2542"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] == * direction: ** LEFT-TO-RIGHT * common name: ** mpbq_msbq_methyltransferase *...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** stearate biosynthesis I (animals and fungi)
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** mpbq_msbq_methyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.295 EC-2.1.1.295]
 
* Synonym(s):
 
* Synonym(s):
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** stearic acid biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[RXN-9543]]
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** 1 [[MPBQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DMPBQ]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_6671]]
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** 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 2,3-dimethyl-6-phytyl-1,4-benzoquinol[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-creinhardtii]]
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== Genes associated with this reaction  ==
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* [[RXN-9544]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 associated gene(s):
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* Gene: [[Tiso_gene_11392]]
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*** [[Tiso_gene_8022]]
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** Source: [[orthology-synechocystis]]
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*** [[Tiso_gene_13083]]
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** Source: [[orthology-esiliculosus]]
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** 2 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_2596]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[RXN-9623]]
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** Source: [[orthology-creinhardtii]]
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** 10 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_9394]]
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
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*** [[Tiso_gene_13394]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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*** [[Tiso_gene_12275]]
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== Reconstruction information  ==
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*** [[Tiso_gene_10876]]
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* Category: [[orthology]]
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*** [[Tiso_gene_7855]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_348]]
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_136]]
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** Source: [[orthology-synechocystis]]
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*** [[Tiso_gene_135]]
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_500]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_4191]]
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*** Tool: [[pantograph]]
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** 5 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-9624]]
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** 2 associated gene(s):
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*** [[Tiso_gene_7477]]
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*** [[Tiso_gene_801]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9545 RXN-9545]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9546 RXN-9546]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33154}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07501 R07501]
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{{#set: common name=stearate biosynthesis I (animals and fungi)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=stearic acid biosynthesis}}
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{{#set: common name=mpbq_msbq_methyltransferase}}
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{{#set: reaction found=4}}
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{{#set: ec number=EC-2.1.1.295}}
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{{#set: total reaction=6}}
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{{#set: gene associated=Tiso_gene_11392|Tiso_gene_2596}}
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{{#set: completion rate=67.0}}
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{{#set: in pathway=PWY-1422}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:09, 21 March 2018

Reaction RXN-2542

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mpbq_msbq_methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-methyl-6-phytyl-1,4-benzoquinol[c] + 1 S-adenosyl-L-methionine[c] => 1 H+[c] + 1 S-adenosyl-L-homocysteine[c] + 1 2,3-dimethyl-6-phytyl-1,4-benzoquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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