Difference between revisions of "RXN-7784"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15360 CPD-15360] == * smiles: ** CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-]...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroflavonol-4-reductase *...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15360 CPD-15360] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] ==
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* smiles:
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* direction:
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** CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(S)N=3))
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 2-thio-N6-dimethylallyladenosine37 in tRNA
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** dihydroflavonol-4-reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
 
* Synonym(s):
 
* Synonym(s):
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** tRNA-(2-thio-N6-dimethylallyladenosine37)
 
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** a tRNA containing 2-thio-N6-dimethylallyladenosine37
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14481]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-7087]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7088]][c] '''+''' 1 [[NADP]][c]
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* [[RXN-14480]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 (+)-dihydromyricetin[c] '''+''' 1 NADPH[c] '''+''' 2 H+[c] '''=>''' 1 (2R,3S,4S)-leucodelphinidin[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9504]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_15272]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_9503]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_11016]]
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** Source: [[orthology-athaliana]]
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== Pathways  ==
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* [[PWY-5152]], leucodelphinidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74416 74416]
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** [http://www.genome.jp/dbget-bin/www_bget?R05038 R05038]
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{{#set: smiles=CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(S)N=3))}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-thio-N6-dimethylallyladenosine37 in tRNA}}
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{{#set: common name=dihydroflavonol-4-reductase}}
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{{#set: common name=tRNA-(2-thio-N6-dimethylallyladenosine37)|a tRNA containing 2-thio-N6-dimethylallyladenosine37}}
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{{#set: ec number=EC-1.1.1.219}}
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{{#set: consumed by=RXN-14481}}
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{{#set: gene associated=Tiso_gene_9504|Tiso_gene_15272|Tiso_gene_9503|Tiso_gene_11016}}
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{{#set: produced by=RXN-14480}}
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{{#set: in pathway=PWY-5152}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:09, 21 March 2018

Reaction RXN-7784

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydroflavonol-4-reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (+)-dihydromyricetin[c] + 1 NADPH[c] + 2 H+[c] => 1 (2R,3S,4S)-leucodelphinidin[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5152, leucodelphinidin biosynthesis: PWY-5152
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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