Difference between revisions of "RXN-1224"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1224 RXN-1224] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1224 RXN-1224] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** 5,6-dimethylbenzimidazole biosynthesis I (aerobic)
+
** [http://enzyme.expasy.org/EC/2.4.1.M2 EC-2.4.1.M2]
 
* Synonym(s):
 
* Synonym(s):
−
** DMB biosynthesis I
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[RIBOFLAVINKIN-RXN]]
+
** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[UDP-SULFOQUINOVOSE]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFOQUINOVOSYLDIACYLGLYCEROL]][c]
−
** 3 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_7479]]
+
** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 UDP-α-D-sulfoquinovopyranose[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 an 6-sulfo-α-D-quinovosyl diacylglycerol[c]
−
*** [[Tiso_gene_16837]]
+
 
−
*** [[Tiso_gene_1086]]
+
== Genes associated with this reaction  ==
−
** 4 reconstruction source(s) associated:
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[orthology-athaliana]]
+
* Gene: [[Tiso_gene_7966]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[orthology-synechocystis]]
+
* Gene: [[Tiso_gene_17894]]
−
*** [[orthology-esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
== Reaction(s) not found ==
+
* Gene: [[Tiso_gene_12341]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=FMNREDUCT-RXN FMNREDUCT-RXN]
+
** Source: [[orthology-esiliculosus]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8771 RXN-8771]
+
* Gene: [[Tiso_gene_11792]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9428]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10734]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_412]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3385]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_19034]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10863]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15050]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[PWYQT-4427]], sulfoquinovosyl diacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4427 PWYQT-4427]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
* LIGAND-RXN:
−
{{#set: common name=5,6-dimethylbenzimidazole biosynthesis I (aerobic)}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R06867 R06867]
−
{{#set: common name=DMB biosynthesis I}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction found=1}}
+
{{#set: ec number=EC-2.4.1.M2}}
−
{{#set: total reaction=3}}
+
{{#set: gene associated=Tiso_gene_7966|Tiso_gene_17894|Tiso_gene_12341|Tiso_gene_11792|Tiso_gene_9428|Tiso_gene_10734|Tiso_gene_412|Tiso_gene_3385|Tiso_gene_19034|Tiso_gene_10863|Tiso_gene_15050}}
−
{{#set: completion rate=33.0}}
+
{{#set: in pathway=PWYQT-4427}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:10, 21 March 2018

Reaction RXN-1224

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYQT-4427, sulfoquinovosyl diacylglycerol biosynthesis: PWYQT-4427
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-1224&oldid=39914"