Difference between revisions of "PWY-6313"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
 
* common name:
 
* common name:
−
** UMP biosynthesis III
+
** serotonin degradation
 
* Synonym(s):
 
* Synonym(s):
−
** uridine-5'-phosphate biosynthesis III
 
−
** de novo biosynthesis of uridine-5'-phosphate III
 
−
** de novo biosynthesis of uridine-5'-monophosphate III
 
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''5''' reactions found over '''6''' reactions in the full pathway
+
  '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[ASPCARBTRANS-RXN]]
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* [[RXN-10777]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_13527]]
+
*** [[Tiso_gene_5505]]
−
** 7 reconstruction source(s) associated:
+
** 1 reconstruction source(s) associated:
−
*** [[annotation-experimental_annotation]]
+
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
 +
* [[RXN-10779]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-10780]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_7322]]
 +
*** [[Tiso_gene_3513]]
 +
** 2 reconstruction source(s) associated:
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
−
*** [[orthology-synechocystis]]
+
*** [[orthology-esiliculosus]]
−
*** [[manual-primary_network]]
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* [[RXN-10781]]
−
*** [[orthology-creinhardtii]]
+
** 5 associated gene(s):
−
* [[CARBPSYN-RXN]]
+
*** [[Tiso_gene_6562]]
−
** 3 associated gene(s):
+
*** [[Tiso_gene_7649]]
−
*** [[Tiso_gene_4976]]
+
*** [[Tiso_gene_5424]]
−
*** [[Tiso_gene_4975]]
+
*** [[Tiso_gene_6563]]
−
*** [[Tiso_gene_4685]]
+
*** [[Tiso_gene_5425]]
−
** 4 reconstruction source(s) associated:
+
** 1 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[manual-primary_network]]
+
* [[RXN-10782]]
−
*** [[annotation-experimental_annotation]]
+
** 1 associated gene(s):
 +
*** [[Tiso_gene_5505]]
 +
** 1 reconstruction source(s) associated:
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[DIHYDROOROT-RXN]]
+
* [[RXN-10784]]
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_15379]]
+
−
** 5 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[annotation-experimental_annotation]]
+
−
* [[OROPRIBTRANS-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_11163]]
+
−
*** [[Tiso_gene_18647]]
+
−
*** [[Tiso_gene_11164]]
+
−
** 4 reconstruction source(s) associated:
+
−
*** [[orthology-athaliana]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
* [[OROTPDECARB-RXN]]
+
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Tiso_gene_20050]]
+
*** [[Tiso_gene_14140]]
−
*** [[Tiso_gene_18647]]
+
*** [[Tiso_gene_14141]]
−
** 5 reconstruction source(s) associated:
+
** 1 reconstruction source(s) associated:
−
*** [[orthology-athaliana]]
+
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-synechocystis]]
 
−
*** [[orthology-esiliculosus]]
 
−
*** [[manual-primary_network]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=OROTATE-REDUCTASE-NADH-RXN OROTATE-REDUCTASE-NADH-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10778 RXN-10778]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-201174}}
+
{{#set: taxonomic range=TAX-33208}}
−
{{#set: taxonomic range=TAX-1239}}
+
{{#set: common name=serotonin degradation}}
−
{{#set: taxonomic range=TAX-2157}}
+
{{#set: reaction found=6}}
−
{{#set: common name=UMP biosynthesis III}}
+
{{#set: total reaction=7}}
−
{{#set: common name=uridine-5'-phosphate biosynthesis III|de novo biosynthesis of uridine-5'-phosphate III|de novo biosynthesis of uridine-5'-monophosphate III}}
+
{{#set: completion rate=86.0}}
−
{{#set: reaction found=5}}
+
−
{{#set: total reaction=6}}
+
−
{{#set: completion rate=83.0}}
+

Latest revision as of 19:10, 21 March 2018

Pathway PWY-6313

  • taxonomic range:
  • common name:
    • serotonin degradation
  • Synonym(s):

Reaction(s) found

6 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6313&oldid=39925"